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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/Molinfo__field_8cpp_source.html below:

NCBI C++ ToolKit: src/objects/macro/Molinfo_field.cpp Source File

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Go to the SVN repository for this file.

62  if

((*it)->IsMolinfo()) {

63

molinfo = &((*it)->GetMolinfo());

73

->FindName(molinfo->

GetBiomol

(),

true

);

79

->FindName(molinfo->

GetTech

(),

true

);

91  if

(rval ==

"dna"

|| rval ==

"rna"

) {

94  else if

(rval ==

"aa"

) {

97  else if

(rval ==

"na"

) {

114  else if

(rval ==

"ds"

) {

121  if

(rval ==

"unknown"

|| rval ==

"not-set"

) rval =

kEmptyStr

;

User-defined methods of the data storage class.

string GetSequenceQualFromBioseq(CConstRef< CBioseq > bioseq) const

#define ITERATE(Type, Var, Cont)

ITERATE macro to sequence through container elements.

#define ENUM_METHOD_NAME(EnumName)

bool Empty(void) const THROWS_NONE

Check if CConstRef is empty – not pointing to any object which means having a null value.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

static string & ToUpper(string &str)

Convert string to upper case – string& version.

E_Choice Which(void) const

Which variant is currently selected.

TStrand GetStrand(void) const

Get the Strand member data.

bool CanGetStrand(void) const

Check if it is safe to call GetStrand method.

const TInst & GetInst(void) const

Get the Inst member data.

TTopology GetTopology(void) const

Get the Topology member data.

bool CanGetTopology(void) const

Check if it is safe to call GetTopology method.

TTech GetTech(void) const

Get the Tech member data.

const Tdata & Get(void) const

Get the member data.

bool CanGetDescr(void) const

Check if it is safe to call GetDescr method.

TMol GetMol(void) const

Get the Mol member data.

TBiomol GetBiomol(void) const

Get the Biomol member data.

TCompleteness GetCompleteness(void) const

Get the Completeness member data.

const TDescr & GetDescr(void) const

Get the Descr member data.


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