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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/MSSpectrum___8hpp_source.html below:

NCBI C++ ToolKit: include/objects/omssa/MSSpectrum_.hpp Source File

41 #ifndef OBJECTS_OMSSA_MSSPECTRUM_BASE_HPP 42 #define OBJECTS_OMSSA_MSSPECTRUM_BASE_HPP 54 #ifndef BEGIN_objects_SCOPE 55 # define BEGIN_objects_SCOPE BEGIN_SCOPE(objects) 56 # define END_objects_SCOPE END_SCOPE(objects) 95  typedef

vector< int >

TMz

;

98  typedef

list< string >

TIds

;

126  bool

IsSetNumber(

void

)

const

;

133  bool

CanGetNumber(

void

)

const

;

136  void

ResetNumber(

void

);

142  TNumber

GetNumber(

void

)

const

;

164  bool

IsSetCharge(

void

)

const

;

171  bool

CanGetCharge(

void

)

const

;

174  void

ResetCharge(

void

);

196  bool

IsSetPrecursormz(

void

)

const

;

203  bool

CanGetPrecursormz(

void

)

const

;

206  void

ResetPrecursormz(

void

);

234  bool

IsSetMz(

void

)

const

;

241  bool

CanGetMz(

void

)

const

;

244  void

ResetMz(

void

);

250  const TMz

& GetMz(

void

)

const

;

266  bool

IsSetAbundance(

void

)

const

;

273  bool

CanGetAbundance(

void

)

const

;

276  void

ResetAbundance(

void

);

282  const TAbundance

& GetAbundance(

void

)

const

;

298  bool

IsSetIscale(

void

)

const

;

305  bool

CanGetIscale(

void

)

const

;

308  void

ResetIscale(

void

);

314  TIscale

GetIscale(

void

)

const

;

336  bool

IsSetIds(

void

)

const

;

343  bool

CanGetIds(

void

)

const

;

346  void

ResetIds(

void

);

358  TIds

& SetIds(

void

);

368  bool

IsSetNamevalue(

void

)

const

;

375  bool

CanGetNamevalue(

void

)

const

;

378  void

ResetNamevalue(

void

);

384  const TNamevalue

& GetNamevalue(

void

)

const

;

393  virtual void

Reset(

void

);

Base class for all serializable objects.

static char UnassignedByte(void)

void ThrowUnassigned(TMemberIndex index) const

uint32_t Uint4

4-byte (32-bit) unsigned integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_OMSSA_EXPORT

list< CRef< CNameValue > > m_Namevalue

const TMz & GetMz(void) const

Get the Mz member data.

TPrecursormz & SetPrecursormz(void)

Assign a value to Precursormz data member.

TNumber & SetNumber(void)

Assign a value to Number data member.

bool CanGetCharge(void) const

Check if it is safe to call GetCharge method.

bool IsSetAbundance(void) const

scaled product abundance Check if a value has been assigned to Abundance data member.

TAbundance & SetAbundance(void)

Assign a value to Abundance data member.

bool IsSetCharge(void) const

may be more than one if unknown Check if a value has been assigned to Charge data member.

bool IsSetPrecursormz(void) const

scaled precursor m/z, scale is in MSSearchSettings Check if a value has been assigned to Precursormz ...

Tparent::CMemberIndex< E_memberIndex, 9 > TmemberIndex

const TAbundance & GetAbundance(void) const

Get the Abundance member data.

bool CanGetPrecursormz(void) const

Check if it is safe to call GetPrecursormz method.

TIds & SetIds(void)

Assign a value to Ids data member.

CMSSpectrum_Base(const CMSSpectrum_Base &)

void ResetNumber(void)

Reset Number data member.

bool CanGetIds(void) const

Check if it is safe to call GetIds method.

bool CanGetNamevalue(void) const

Check if it is safe to call GetNamevalue method.

TNamevalue & SetNamevalue(void)

Assign a value to Namevalue data member.

bool CanGetIscale(void) const

Check if it is safe to call GetIscale method.

bool IsSetNumber(void) const

unique number of spectrum Check if a value has been assigned to Number data member.

const TNamevalue & GetNamevalue(void) const

Get the Namevalue member data.

void ResetPrecursormz(void)

Reset Precursormz data member.

void ResetIscale(void)

Reset Iscale data member.

bool CanGetMz(void) const

Check if it is safe to call GetMz method.

CMSSpectrum_Base & operator=(const CMSSpectrum_Base &)

bool CanGetNumber(void) const

Check if it is safe to call GetNumber method.

vector< int > m_Abundance

DECLARE_INTERNAL_TYPE_INFO()

bool IsSetIscale(void) const

abundance scale, float to integer Check if a value has been assigned to Iscale data member.

const TCharge & GetCharge(void) const

Get the Charge member data.

TMz & SetMz(void)

Assign a value to Mz data member.

bool IsSetIds(void) const

ids/filenames Check if a value has been assigned to Ids data member.

const TIds & GetIds(void) const

Get the Ids member data.

TNumber GetNumber(void) const

Get the Number member data.

TCharge & SetCharge(void)

Assign a value to Charge data member.

list< CRef< CNameValue > > TNamevalue

TIscale GetIscale(void) const

Get the Iscale member data.

bool CanGetAbundance(void) const

Check if it is safe to call GetAbundance method.

TIscale & SetIscale(void)

Assign a value to Iscale data member.

bool IsSetMz(void) const

scaled product m/z Check if a value has been assigned to Mz data member.

bool IsSetNamevalue(void) const

extra info: retention times, etc.

TPrecursormz GetPrecursormz(void) const

Get the Precursormz member data.

const GenericPointer< typename T::ValueType > T2 value

static bool GetIds(const T &d, set< string > &labels, const string name="", bool detect=false, bool found=false)


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