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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/MSMod___8hpp_source.html below:

NCBI C++ ToolKit: include/objects/omssa/MSMod_.hpp Source File

41 #ifndef OBJECTS_OMSSA_MSMOD_BASE_HPP 42 #define OBJECTS_OMSSA_MSMOD_BASE_HPP 48 #ifndef BEGIN_objects_SCOPE 49 # define BEGIN_objects_SCOPE BEGIN_SCOPE(objects) 50 # define END_objects_SCOPE END_SCOPE(objects)

#define ENUM_METHOD_NAME(EnumName)

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_OMSSA_EXPORT

EMSMod

enumerate modifications

@ eMSMod_phosphorylations

phosphorylation of S

@ eMSMod_ntermpeptioacetyl

@ eMSMod_ntermpeppropionylheavy

@ eMSMod_methylq

methylation of Q

@ eMSMod_deamidationkq

deamidation of K and Q

@ eMSMod_usermod1

start of user defined mods

@ eMSMod_carbamidomethyle

@ eMSMod_formylkynureninw

@ eMSMod_ntermmethyl

N terminal protein methyl.

@ eMSMod_trideuteromethyld

trideuteromethylation of D

@ eMSMod_ctermpeptrideuteromethyl

C terminal trideuteromethylation.

@ eMSMod_carbamidomethyld

@ eMSMod_ntermmcleave

N terminal methionine cleavage.

@ eMSMod_ntermpepdimethyl

@ eMSMod_methythiold

beta methythiolation of D

@ eMSMod_phosphoneutrallossh

@ eMSMod_unknown

modification of unknown type

@ eMSMod_ntermtrimethyl

N terminal protein trimethyl.

@ eMSMod_twoamino3oxobutanoicacid

@ eMSMod_ntermpeppropionyl

@ eMSMod_trimethylk

trimethylation of K

@ eMSMod_carbamidomethylk

@ eMSMod_trideuteromethyle

trideuteromethylation of E

@ eMSMod_carbamidomethylc

carbamidomethyl cysteine

@ eMSMod_methylk

methylation of K

@ eMSMod_ctermpepmethyl

C terminal methylation.

@ eMSMod_camthiopropanoylk

@ eMSMod_ntermpepglucuronylg

@ eMSMod_phosphorylationy

phosphorylation of Y

@ eMSMod_phosphoneutrallosst

@ eMSMod_ntermpepmyristoyeylationg

@ eMSMod_usermod10

end of user defined mods

@ eMSMod_oxym

oxidation of methionine

@ eMSMod_max

maximum number of mods

@ eMSMod_ntermacetyl

N terminal protein acetyl.

@ eMSMod_propionamidec

propionamide cysteine

@ eMSMod_phosphoneutrallossd

@ eMSMod_methyld

methylation of D

@ eMSMod_phosphoneutrallossc

@ eMSMod_ntermpeptripalmitatec

@ eMSMod_ntermpepmyristoyl4hg

@ eMSMod_phosphoneutrallosss

@ eMSMod_hydroxykynureninw

@ eMSMod_methyle

methylation of E

@ eMSMod_ctermpephselactm

@ eMSMod_carboxymethylc

carboxymethyl cysteine

@ eMSMod_ntermpepmyristoylationg

@ eMSMod_carboxykynurenin

@ eMSMod_phosphorylationt

phosphorylation of T


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