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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/MSModSpec___8hpp_source.html below:

NCBI C++ ToolKit: include/objects/omssa/MSModSpec_.hpp Source File

41 #ifndef OBJECTS_OMSSA_MSMODSPEC_BASE_HPP 42 #define OBJECTS_OMSSA_MSMODSPEC_BASE_HPP 55 #ifndef BEGIN_objects_SCOPE 56 # define BEGIN_objects_SCOPE BEGIN_SCOPE(objects) 57 # define END_objects_SCOPE END_SCOPE(objects) 131  bool

IsSetMod(

void

)

const

;

138  bool

CanGetMod(

void

)

const

;

141  void

ResetMod(

void

);

147  TMod

GetMod(

void

)

const

;

159  TMod

& SetMod(

void

);

169  bool

IsSetType(

void

)

const

;

176  bool

CanGetType(

void

)

const

;

179  void

ResetType(

void

);

185  TType

GetType(

void

)

const

;

197  TType

& SetType(

void

);

207  bool

IsSetName(

void

)

const

;

214  bool

CanGetName(

void

)

const

;

217  void

ResetName(

void

);

223  const TName

& GetName(

void

)

const

;

236  TName

& SetName(

void

);

246  bool

IsSetMonomass(

void

)

const

;

253  bool

CanGetMonomass(

void

)

const

;

256  void

ResetMonomass(

void

);

284  bool

IsSetAveragemass(

void

)

const

;

291  bool

CanGetAveragemass(

void

)

const

;

294  void

ResetAveragemass(

void

);

322  bool

IsSetN15mass(

void

)

const

;

329  bool

CanGetN15mass(

void

)

const

;

332  void

ResetN15mass(

void

);

360  bool

IsSetResidues(

void

)

const

;

367  bool

CanGetResidues(

void

)

const

;

370  void

ResetResidues(

void

);

376  const TResidues

& GetResidues(

void

)

const

;

392  bool

IsSetNeutralloss(

void

)

const

;

399  bool

CanGetNeutralloss(

void

)

const

;

402  void

ResetNeutralloss(

void

);

430  bool

IsSetUnimod(

void

)

const

;

437  bool

CanGetUnimod(

void

)

const

;

440  void

ResetUnimod(

void

);

446  TUnimod

GetUnimod(

void

)

const

;

468  bool

IsSetPsi_ms(

void

)

const

;

475  bool

CanGetPsi_ms(

void

)

const

;

478  void

ResetPsi_ms(

void

);

484  const TPsi_ms

& GetPsi_ms(

void

)

const

;

500  virtual void

Reset(

void

);

656  m_Name

= std::forward<CMSModSpec_Base::TName>(

value

);

User-defined methods of the data storage class.

Base class for all serializable objects.

static char UnassignedByte(void)

void ThrowUnassigned(TMemberIndex index) const

static string UnassignedString(void)

uint32_t Uint4

4-byte (32-bit) unsigned integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_OMSSA_EXPORT

bool CanGetN15mass(void) const

Check if it is safe to call GetN15mass method.

TName & SetName(void)

Assign a value to Name data member.

void ResetType(void)

Reset Type data member.

bool IsSetMod(void) const

what is the mod Check if a value has been assigned to Mod data member.

bool CanGetAveragemass(void) const

Check if it is safe to call GetAveragemass method.

bool IsSetUnimod(void) const

the equivalent Unimod Accession number Check if a value has been assigned to Unimod data member.

bool IsSetNeutralloss(void) const

loss after precursor mass determination Check if a value has been assigned to Neutralloss data member...

void ResetMod(void)

Reset Mod data member.

void ResetMonomass(void)

Reset Monomass data member.

const TNeutralloss & GetNeutralloss(void) const

Get the Neutralloss member data.

TAveragemass & SetAveragemass(void)

Assign a value to Averagemass data member.

list< string > m_Residues

const TResidues & GetResidues(void) const

Get the Residues member data.

const TPsi_ms & GetPsi_ms(void) const

Get the Psi_ms member data.

void ResetUnimod(void)

Reset Unimod data member.

bool CanGetPsi_ms(void) const

Check if it is safe to call GetPsi_ms method.

CMSModSpec_Base(const CMSModSpec_Base &)

TAveragemass GetAveragemass(void) const

Get the Averagemass member data.

CRef< TNeutralloss > m_Neutralloss

TN15mass & SetN15mass(void)

Assign a value to N15mass data member.

bool CanGetResidues(void) const

Check if it is safe to call GetResidues method.

bool CanGetMod(void) const

Check if it is safe to call GetMod method.

bool CanGetNeutralloss(void) const

Check if it is safe to call GetNeutralloss method.

TMod GetMod(void) const

Get the Mod member data.

void ResetAveragemass(void)

Reset Averagemass data member.

bool IsSetAveragemass(void) const

average mass Check if a value has been assigned to Averagemass data member.

bool CanGetName(void) const

Check if it is safe to call GetName method.

TType GetType(void) const

Get the Type member data.

CMSModSpec_Base & operator=(const CMSModSpec_Base &)

TPsi_ms & SetPsi_ms(void)

Assign a value to Psi_ms data member.

bool IsSetPsi_ms(void) const

the PSI-MS equivalent name Check if a value has been assigned to Psi_ms data member.

bool CanGetType(void) const

Check if it is safe to call GetType method.

const TName & GetName(void) const

Get the Name member data.

Tparent::CMemberIndex< E_memberIndex, 11 > TmemberIndex

bool CanGetUnimod(void) const

Check if it is safe to call GetUnimod method.

bool IsSetType(void) const

modification type Check if a value has been assigned to Type data member.

bool IsSetResidues(void) const

residues to apply mod to Check if a value has been assigned to Residues data member.

void ResetN15mass(void)

Reset N15mass data member.

TType & SetType(void)

Assign a value to Type data member.

TUnimod & SetUnimod(void)

Assign a value to Unimod data member.

TMonomass & SetMonomass(void)

Assign a value to Monomass data member.

bool IsSetName(void) const

friendly name of mod Check if a value has been assigned to Name data member.

TMonomass GetMonomass(void) const

Get the Monomass member data.

TUnimod GetUnimod(void) const

Get the Unimod member data.

DECLARE_INTERNAL_TYPE_INFO()

bool IsSetMonomass(void) const

monoisotopic mass Check if a value has been assigned to Monomass data member.

bool IsSetN15mass(void) const

monoisotopic n15 mass Check if a value has been assigned to N15mass data member.

TMod & SetMod(void)

Assign a value to Mod data member.

TN15mass GetN15mass(void) const

Get the N15mass member data.

TResidues & SetResidues(void)

Assign a value to Residues data member.

bool CanGetMonomass(void) const

Check if it is safe to call GetMonomass method.

unsigned int

A callback function used to compare two keys in a database.

const GenericPointer< typename T::ValueType > T2 value


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