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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/MSIterativeSettings___8hpp_source.html below:

NCBI C++ ToolKit: include/objects/omssa/MSIterativeSettings_.hpp Source File

41 #ifndef OBJECTS_OMSSA_MSITERATIVESETTINGS_BASE_HPP 42 #define OBJECTS_OMSSA_MSITERATIVESETTINGS_BASE_HPP 48 #ifndef BEGIN_objects_SCOPE 49 # define BEGIN_objects_SCOPE BEGIN_SCOPE(objects) 50 # define END_objects_SCOPE END_SCOPE(objects) 106  bool

IsSetResearchthresh(

void

)

const

;

113  bool

CanGetResearchthresh(

void

)

const

;

116  void

ResetResearchthresh(

void

);

144  bool

IsSetSubsetthresh(

void

)

const

;

151  bool

CanGetSubsetthresh(

void

)

const

;

154  void

ResetSubsetthresh(

void

);

182  bool

IsSetReplacethresh(

void

)

const

;

189  bool

CanGetReplacethresh(

void

)

const

;

192  void

ResetReplacethresh(

void

);

213  virtual void

Reset(

void

);

Iterative search settings.

Base class for all serializable objects.

static char UnassignedByte(void)

void ThrowUnassigned(TMemberIndex index) const

uint32_t Uint4

4-byte (32-bit) unsigned integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_OMSSA_EXPORT

TReplacethresh GetReplacethresh(void) const

Get the Replacethresh member data.

TResearchthresh & SetResearchthresh(void)

Assign a value to Researchthresh data member.

Tparent::CMemberIndex< E_memberIndex, 4 > TmemberIndex

void ResetReplacethresh(void)

Reset Replacethresh data member.

bool CanGetSubsetthresh(void) const

Check if it is safe to call GetSubsetthresh method.

TReplacethresh & SetReplacethresh(void)

Assign a value to Replacethresh data member.

bool CanGetResearchthresh(void) const

Check if it is safe to call GetResearchthresh method.

bool CanGetReplacethresh(void) const

Check if it is safe to call GetReplacethresh method.

CMSIterativeSettings_Base(const CMSIterativeSettings_Base &)

TSubsetthresh GetSubsetthresh(void) const

Get the Subsetthresh member data.

DECLARE_INTERNAL_TYPE_INFO()

TSubsetthresh & SetSubsetthresh(void)

Assign a value to Subsetthresh data member.

CMSIterativeSettings_Base & operator=(const CMSIterativeSettings_Base &)

TResearchthresh GetResearchthresh(void) const

Get the Researchthresh member data.

bool IsSetResearchthresh(void) const

e-val threshold for re-searching spectra, 0 = always re-search Check if a value has been assigned to ...

void ResetSubsetthresh(void)

Reset Subsetthresh data member.

void ResetResearchthresh(void)

Reset Researchthresh data member.

bool IsSetReplacethresh(void) const

e-val threshold for replacing hitset, 0 = only if better Check if a value has been assigned to Replac...

bool IsSetSubsetthresh(void) const

e-val threshold for picking sequence subset, 0 = all sequences Check if a value has been assigned to ...

const GenericPointer< typename T::ValueType > T2 value


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