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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/MSHits_8cpp_source.html below:

NCBI C++ ToolKit: src/objects/omssa/MSHits.cpp Source File

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(!StringOut.empty()) StringOut +=

;

((*i)->GetSite() <

(StringOut.size()))

StringOut[(*i)->GetSite()] =

((

) StringOut[(*i)->GetSite()]);

User-defined methods of the data storage class.

void MakeModString(string &StringOut, CRef< CMSModSpecSet > Modset) const

Makes a string of mods, positions for display purposes.

void MakePepString(string &StringOut) const

Makes a peptide AA string, lower case for mods.

const char * GetModName(int Mod) const

get modification friendly name

#define ITERATE(Type, Var, Cont)

ITERATE macro to sequence through container elements.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

static string IntToString(int value, TNumToStringFlags flags=0, int base=10)

Convert int to string.

static string & ToUpper(string &str)

Convert string to upper case – string& version.

bool CanGetMods(void) const

Check if it is safe to call GetMods method.

list< CRef< CMSModHit > > TMods

bool CanGetPepstring(void) const

Check if it is safe to call GetPepstring method.

const TPepstring & GetPepstring(void) const

Get the Pepstring member data.

const TMods & GetMods(void) const

Get the Mods member data.

@ eMSMod_max

maximum number of mods

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