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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/ID2S__Seq__id__Interval___8hpp_source.html below:

NCBI C++ ToolKit: include/objects/seqsplit/ID2S_Seq_id_Interval_.hpp Source File

41 #ifndef OBJECTS_SEQSPLIT_ID2S_SEQ_ID_INTERVAL_BASE_HPP 42 #define OBJECTS_SEQSPLIT_ID2S_SEQ_ID_INTERVAL_BASE_HPP 48 #ifndef BEGIN_objects_SCOPE 49 # define BEGIN_objects_SCOPE BEGIN_SCOPE(objects) 50 # define END_objects_SCOPE END_SCOPE(objects) 108  bool

IsSetSeq_id(

void

)

const

;

115  bool

CanGetSeq_id(

void

)

const

;

118  void

ResetSeq_id(

void

);

124  const TSeq_id

& GetSeq_id(

void

)

const

;

145  bool

IsSetStart(

void

)

const

;

152  bool

CanGetStart(

void

)

const

;

155  void

ResetStart(

void

);

173  TStart

& SetStart(

void

);

182  bool

IsSetLength(

void

)

const

;

189  bool

CanGetLength(

void

)

const

;

192  void

ResetLength(

void

);

195  void

SetDefaultLength(

void

);

216  virtual void

Reset(

void

);

CID2S_Seq_id_Interval_Base –.

Base class for all serializable objects.

static char UnassignedByte(void)

void ThrowUnassigned(TMemberIndex index) const

TSeqPos GetLength(const CSeq_id &id, CScope *scope)

Get sequence length if scope not null, else return max possible TSeqPos.

TSeqPos GetStart(const CSeq_loc &loc, CScope *scope, ESeqLocExtremes ext=eExtreme_Positional)

If only one CBioseq is represented by CSeq_loc, returns the position at the start of the location.

uint32_t Uint4

4-byte (32-bit) unsigned integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

TStart GetStart(void) const

Get the Start member data.

void SetDefaultLength(void)

Assign default value to Length data member.

TStart & SetStart(void)

Assign a value to Start data member.

void ResetSeq_id(void)

Reset Seq_id data member.

void ResetStart(void)

Reset Start data member.

bool CanGetSeq_id(void) const

Check if it is safe to call GetSeq_id method.

bool CanGetLength(void) const

Check if it is safe to call GetLength method.

CID2S_Seq_id_Interval_Base & operator=(const CID2S_Seq_id_Interval_Base &)

TSeq_id & SetSeq_id(void)

Assign a value to Seq_id data member.

const TSeq_id & GetSeq_id(void) const

Get the Seq_id member data.

CID2S_Seq_id_Interval_Base(const CID2S_Seq_id_Interval_Base &)

bool IsSetSeq_id(void) const

Check if a value has been assigned to Seq_id data member.

DECLARE_INTERNAL_TYPE_INFO()

Tparent::CMemberIndex< E_memberIndex, 4 > TmemberIndex

TLength & SetLength(void)

Assign a value to Length data member.

bool CanGetStart(void) const

Check if it is safe to call GetStart method.

bool IsSetStart(void) const

Check if a value has been assigned to Start data member.

void ResetLength(void)

Reset Length data member.

bool IsSetLength(void) const

Check if a value has been assigned to Length data member.

TLength GetLength(void) const

Get the Length member data.

const GenericPointer< typename T::ValueType > T2 value


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