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NCBI C++ ToolKit: include/objects/seqsplit/ID2S_Interval_.hpp Source File

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41 #ifndef OBJECTS_SEQSPLIT_ID2S_INTERVAL_BASE_HPP 42 #define OBJECTS_SEQSPLIT_ID2S_INTERVAL_BASE_HPP 48 #ifndef BEGIN_objects_SCOPE 49 # define BEGIN_objects_SCOPE BEGIN_SCOPE(objects) 50 # define END_objects_SCOPE END_SCOPE(objects) 102  bool

IsSetStart(

void

)

const

;

109  bool

CanGetStart(

void

)

const

;

112  void

ResetStart(

void

);

130  TStart

& SetStart(

void

);

139  bool

IsSetLength(

void

)

const

;

146  bool

CanGetLength(

void

)

const

;

149  void

ResetLength(

void

);

152  void

SetDefaultLength(

void

);

173  virtual void

Reset(

void

);

Base class for all serializable objects.

unsigned int TSeqPos

Type for sequence locations and lengths.

static char UnassignedByte(void)

void ThrowUnassigned(TMemberIndex index) const

TSeqPos GetLength(const CSeq_id &id, CScope *scope)

Get sequence length if scope not null, else return max possible TSeqPos.

TSeqPos GetStart(const CSeq_loc &loc, CScope *scope, ESeqLocExtremes ext=eExtreme_Positional)

If only one CBioseq is represented by CSeq_loc, returns the position at the start of the location.

uint32_t Uint4

4-byte (32-bit) unsigned integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

bool IsSetLength(void) const

Check if a value has been assigned to Length data member.

TLength GetLength(void) const

Get the Length member data.

Tparent::CMemberIndex< E_memberIndex, 3 > TmemberIndex

TStart GetStart(void) const

Get the Start member data.

void ResetStart(void)

Reset Start data member.

CID2S_Interval_Base(const CID2S_Interval_Base &)

bool CanGetStart(void) const

Check if it is safe to call GetStart method.

DECLARE_INTERNAL_TYPE_INFO()

TLength & SetLength(void)

Assign a value to Length data member.

TStart & SetStart(void)

Assign a value to Start data member.

bool CanGetLength(void) const

Check if it is safe to call GetLength method.

void SetDefaultLength(void)

Assign default value to Length data member.

void ResetLength(void)

Reset Length data member.

bool IsSetStart(void) const

Check if a value has been assigned to Start data member.

CID2S_Interval_Base & operator=(const CID2S_Interval_Base &)

const GenericPointer< typename T::ValueType > T2 value

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