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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/Gene__ref___8hpp_source.html below:

NCBI C++ ToolKit: include/objects/seqfeat/Gene_ref_.hpp Source File

41 #ifndef OBJECTS_SEQFEAT_GENE_REF_BASE_HPP 42 #define OBJECTS_SEQFEAT_GENE_REF_BASE_HPP 54 #ifndef BEGIN_objects_SCOPE 55 # define BEGIN_objects_SCOPE BEGIN_SCOPE(objects) 56 # define END_objects_SCOPE END_SCOPE(objects) 101  typedef

vector< CRef< CDbtag > >

TDb

;

132  bool

IsSetLocus(

void

)

const

;

139  bool

CanGetLocus(

void

)

const

;

142  void

ResetLocus(

void

);

148  const TLocus

& GetLocus(

void

)

const

;

161  TLocus

& SetLocus(

void

);

171  bool

IsSetAllele(

void

)

const

;

178  bool

CanGetAllele(

void

)

const

;

181  void

ResetAllele(

void

);

187  const TAllele

& GetAllele(

void

)

const

;

210  bool

IsSetDesc(

void

)

const

;

217  bool

CanGetDesc(

void

)

const

;

220  void

ResetDesc(

void

);

226  const TDesc

& GetDesc(

void

)

const

;

239  TDesc

& SetDesc(

void

);

249  bool

IsSetMaploc(

void

)

const

;

256  bool

CanGetMaploc(

void

)

const

;

259  void

ResetMaploc(

void

);

265  const TMaploc

& GetMaploc(

void

)

const

;

288  bool

IsSetPseudo(

void

)

const

;

295  bool

CanGetPseudo(

void

)

const

;

298  void

ResetPseudo(

void

);

301  void

SetDefaultPseudo(

void

);

307  TPseudo

GetPseudo(

void

)

const

;

329  bool

IsSetDb(

void

)

const

;

336  bool

CanGetDb(

void

)

const

;

339  void

ResetDb(

void

);

345  const TDb

& GetDb(

void

)

const

;

361  bool

IsSetSyn(

void

)

const

;

368  bool

CanGetSyn(

void

)

const

;

371  void

ResetSyn(

void

);

377  const TSyn

& GetSyn(

void

)

const

;

383  TSyn

& SetSyn(

void

);

393  bool

IsSetLocus_tag(

void

)

const

;

400  bool

CanGetLocus_tag(

void

)

const

;

403  void

ResetLocus_tag(

void

);

409  const TLocus_tag

& GetLocus_tag(

void

)

const

;

431  bool

IsSetFormal_name(

void

)

const

;

438  bool

CanGetFormal_name(

void

)

const

;

441  void

ResetFormal_name(

void

);

462  virtual void

Reset(

void

);

477

vector< CRef< CDbtag > >

m_Db

;

523  m_Locus

= std::forward<CGene_ref_Base::TLocus>(

value

);

617  m_Desc

= std::forward<CGene_ref_Base::TDesc>(

value

);

*** Gene *********************************************** * * reference to a gene *

Base class for all serializable objects.

static char UnassignedByte(void)

void ThrowUnassigned(TMemberIndex index) const

static string UnassignedString(void)

uint32_t Uint4

4-byte (32-bit) unsigned integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_SEQFEAT_EXPORT

void ResetPseudo(void)

Reset Pseudo data member.

TSyn & SetSyn(void)

Assign a value to Syn data member.

vector< CRef< CDbtag > > m_Db

bool IsSetSyn(void) const

synonyms for locus Check if a value has been assigned to Syn data member.

bool IsSetFormal_name(void) const

Check if a value has been assigned to Formal_name data member.

Tparent::CMemberIndex< E_memberIndex, 10 > TmemberIndex

const TFormal_name & GetFormal_name(void) const

Get the Formal_name member data.

const TSyn & GetSyn(void) const

Get the Syn member data.

const TDesc & GetDesc(void) const

Get the Desc member data.

bool IsSetPseudo(void) const

pseudogene Check if a value has been assigned to Pseudo data member.

TAllele & SetAllele(void)

Assign a value to Allele data member.

bool CanGetLocus(void) const

Check if it is safe to call GetLocus method.

bool IsSetLocus_tag(void) const

systematic gene name (e.g., MI0001, ORF0069) Check if a value has been assigned to Locus_tag data mem...

bool CanGetDb(void) const

Check if it is safe to call GetDb method.

bool CanGetLocus_tag(void) const

Check if it is safe to call GetLocus_tag method.

bool IsSetLocus(void) const

Official gene symbol Check if a value has been assigned to Locus data member.

TLocus & SetLocus(void)

Assign a value to Locus data member.

bool IsSetDesc(void) const

descriptive name Check if a value has been assigned to Desc data member.

bool CanGetSyn(void) const

Check if it is safe to call GetSyn method.

bool CanGetMaploc(void) const

Check if it is safe to call GetMaploc method.

bool IsSetDb(void) const

ids in other dbases Check if a value has been assigned to Db data member.

TDb & SetDb(void)

Assign a value to Db data member.

bool IsSetAllele(void) const

Official allele designation Check if a value has been assigned to Allele data member.

const TDb & GetDb(void) const

Get the Db member data.

bool IsSetMaploc(void) const

descriptive map location Check if a value has been assigned to Maploc data member.

TLocus_tag & SetLocus_tag(void)

Assign a value to Locus_tag data member.

void SetDefaultPseudo(void)

Assign default value to Pseudo data member.

bool CanGetAllele(void) const

Check if it is safe to call GetAllele method.

CGene_nomenclature TFormal_name

CGene_ref_Base & operator=(const CGene_ref_Base &)

CRef< TFormal_name > m_Formal_name

CGene_ref_Base(const CGene_ref_Base &)

vector< CRef< CDbtag > > TDb

TMaploc & SetMaploc(void)

Assign a value to Maploc data member.

bool CanGetDesc(void) const

Check if it is safe to call GetDesc method.

bool CanGetPseudo(void) const

Check if it is safe to call GetPseudo method.

const TLocus_tag & GetLocus_tag(void) const

Get the Locus_tag member data.

DECLARE_INTERNAL_TYPE_INFO()

const TLocus & GetLocus(void) const

Get the Locus member data.

TPseudo GetPseudo(void) const

Get the Pseudo member data.

TDesc & SetDesc(void)

Assign a value to Desc data member.

const TAllele & GetAllele(void) const

Get the Allele member data.

TPseudo & SetPseudo(void)

Assign a value to Pseudo data member.

bool CanGetFormal_name(void) const

Check if it is safe to call GetFormal_name method.

const TMaploc & GetMaploc(void) const

Get the Maploc member data.

const GenericPointer< typename T::ValueType > T2 value


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