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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/GC__Replicon___8hpp_source.html below:

NCBI C++ ToolKit: include/objects/genomecoll/GC_Replicon_.hpp Source File

ResetSelection(

);

E_Choice Which(

)

;

CheckSelected(E_Choice index)

;

NCBI_NORETURN

ThrowInvalidSelection(E_Choice index)

;

SelectionName(E_Choice index);

list< CRef< CGC_Sequence > >

;

IsSingle(

)

;

& GetSingle(

)

;

IsSet(

)

;

& GetSet(

)

;

& SetSet(

);

*

sm_SelectionNames[];

NCBI_NS_NCBI::CUnionBuffer<TSet>

;

IsSetName(

)

;

CanGetName(

)

;

ResetName(

);

& GetName(

)

;

& SetName(

);

IsSetLocal_name(

)

;

CanGetLocal_name(

)

;

ResetLocal_name(

);

IsSetSequence(

)

;

CanGetSequence(

)

;

ResetSequence(

);

Reset(

);

( m_choice != index )

ThrowInvalidSelection(index);

DoSelect(index, pool);

Select(index, reset, 0);

m_choice == e_Single;

m_choice == e_Set;

CheckSelected(e_Set);

= std::forward<CGC_Replicon_Base::TName>(

);

the sequence(s) representing this molecule in the case of 2L and 2R - the molecule is represented by ...

Base class for all serializable objects.

SBlastSequence GetSequence(const objects::CSeq_loc &sl, EBlastEncoding encoding, objects::CScope *scope, objects::ENa_strand strand=objects::eNa_strand_plus, ESentinelType sentinel=eSentinels, std::string *warnings=NULL)

Retrieves a sequence using the object manager.

void ThrowUnassigned(TMemberIndex index) const

static string UnassignedString(void)

uint32_t Uint4

4-byte (32-bit) unsigned integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_GENOME_COLLECTION_EXPORT

bool IsSet(void) const

Check if variant Set is selected.

bool CanGetLocal_name(void) const

Check if it is safe to call GetLocal_name method.

const TName & GetName(void) const

Get the Name member data.

const TLocal_name & GetLocal_name(void) const

Get the Local_name member data.

CRef< TSequence > m_Sequence

bool IsSingle(void) const

Check if variant Single is selected.

TSet & SetSet(void)

Select the variant.

CGC_Replicon_Base & operator=(const CGC_Replicon_Base &)

E_Choice Which(void) const

Which variant is currently selected.

void Select(E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)

Select the requested variant if needed, allocating CObject variants from memory pool.

Tparent::CMemberIndex< E_memberIndex, 4 > TmemberIndex

DECLARE_INTERNAL_TYPE_INFO()

void ResetSequence(void)

Reset Sequence data member.

CGC_Replicon_Base(const CGC_Replicon_Base &)

NCBI_NS_NCBI::CUnionBuffer< TSet > m_Set

C_Sequence & operator=(const C_Sequence &)

bool CanGetSequence(void) const

Check if it is safe to call GetSequence method.

E_Choice

Choice variants.

bool IsSetName(void) const

name for this molecule the official name, Check if a value has been assigned to Name data member.

const TSequence & GetSequence(void) const

Get the Sequence member data.

NCBI_NS_NCBI::CSerialObject * m_object

bool IsSetLocal_name(void) const

If the chromosome has a different name in this assembly.

C_Sequence(const C_Sequence &)

bool IsSetSequence(void) const

Check if a value has been assigned to Sequence data member.

void Select(E_Choice index, EResetVariant reset=eDoResetVariant)

Select the requested variant if needed.

list< CRef< CGC_Sequence > > TSet

const TSet & GetSet(void) const

Get the variant data.

void CheckSelected(E_Choice index) const

Verify selection, throw exception if it differs from the expected.

TSequence & SetSequence(void)

Assign a value to Sequence data member.

bool CanGetName(void) const

Check if it is safe to call GetName method.

E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

TName & SetName(void)

Assign a value to Name data member.

DECLARE_INTERNAL_TYPE_INFO()

TLocal_name & SetLocal_name(void)

Assign a value to Local_name data member.

const GenericPointer< typename T::ValueType > T2 value

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