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NCBI C++ ToolKit: src/objects/genomecoll/GC_AssemblyUnit.cpp Source File

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User-defined methods of the data storage class.

User-defined methods of the data storage class.

string GetName() const

Retrieve this unit's name.

bool IsPrimaryUnit() const

Is this the primary unit of its full assembly?

string GetFileSafeDisplayName() const

Get file-safe version of full label for assmebly.

CConstRef< CGC_Assembly > GetFullAssembly() const

Access the most specific full assembly the assembly unit belongs to This is needed because assemblies...

CGC_Assembly * m_Assembly

bool IsOrganelle() const

Is this a non-nuclear assembly unit?

string GetFileSafeName() const

Retrieve the file-safe version of assembly name, if available; othwreise default to standard name.

string GetAccession() const

Retrieve this unit's accession.

string GetDisplayName() const

Get full display name of assembly unit.

int GetReleaseId() const

Retrieve the release id for this assembly.

string GetName() const

Retrieve the name of this assembly.

string GetFileSafeName() const

Retrieve the file-safe version of assembly name, if available; othwreise default to standard name.

#define ITERATE(Type, Var, Cont)

ITERATE macro to sequence through container elements.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

static string & Replace(const string &src, const string &search, const string &replace, string &dst, SIZE_TYPE start_pos=0, SIZE_TYPE max_replace=0, SIZE_TYPE *num_replace=0)

Replace occurrences of a substring within a string.

const TName & GetName(void) const

Get the Name member data.

const TUnit & GetUnit(void) const

Get the variant data.

const TDesc & GetDesc(void) const

Get the Desc member data.

list< CRef< CDbtag > > TId

const TFilesafe_name & GetFilesafe_name(void) const

Get the Filesafe_name member data.

bool IsSetFilesafe_name(void) const

Check if a value has been assigned to Filesafe_name data member.

const TPrimary_assembly & GetPrimary_assembly(void) const

Get the Primary_assembly member data.

const TAssembly_set & GetAssembly_set(void) const

Get the variant data.

bool IsUnit(void) const

Check if variant Unit is selected.

const TId & GetId(void) const

Get the Id member data.

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