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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/Cdregion___8hpp_source.html below:

NCBI C++ ToolKit: include/objects/seqfeat/Cdregion_.hpp Source File

IsSetOrf(

)

;

CanGetOrf(

)

;

ResetOrf(

);

GetOrf(

)

;

& SetOrf(

);

IsSetFrame(

)

;

CanGetFrame(

)

;

ResetFrame(

);

SetDefaultFrame(

);

GetFrame(

)

;

& SetFrame(

);

IsSetConflict(

)

;

CanGetConflict(

)

;

ResetConflict(

);

IsSetGaps(

)

;

CanGetGaps(

)

;

ResetGaps(

);

GetGaps(

)

;

& SetGaps(

);

IsSetMismatch(

)

;

CanGetMismatch(

)

;

ResetMismatch(

);

IsSetCode(

)

;

CanGetCode(

)

;

ResetCode(

);

& GetCode(

)

;

& SetCode(

);

IsSetCode_break(

)

;

CanGetCode_break(

)

;

ResetCode_break(

);

IsSetStops(

)

;

CanGetStops(

)

;

ResetStops(

);

GetStops(

)

;

& SetStops(

);

Reset(

);

.NotEmpty();

*** CdRegion *********************************************** * * Instructions to translate from a nuc...

Base class for all serializable objects.

unsigned int TSeqPos

Type for sequence locations and lengths.

static char UnassignedByte(void)

void ThrowUnassigned(TMemberIndex index) const

#define ENUM_METHOD_NAME(EnumName)

uint32_t Uint4

4-byte (32-bit) unsigned integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_SEQFEAT_EXPORT

bool IsSetOrf(void) const

just an ORF ? Check if a value has been assigned to Orf data member.

void ResetMismatch(void)

Reset Mismatch data member.

bool IsSetCode(void) const

genetic code used Check if a value has been assigned to Code data member.

TGaps GetGaps(void) const

Get the Gaps member data.

TStops GetStops(void) const

Get the Stops member data.

TOrf GetOrf(void) const

Get the Orf member data.

void ResetGaps(void)

Reset Gaps data member.

CCdregion_Base(const CCdregion_Base &)

bool CanGetConflict(void) const

Check if it is safe to call GetConflict method.

DECLARE_INTERNAL_TYPE_INFO()

TGaps & SetGaps(void)

Assign a value to Gaps data member.

void SetDefaultFrame(void)

Assign default value to Frame data member.

bool IsSetConflict(void) const

conflict Check if a value has been assigned to Conflict data member.

list< CRef< CCode_break > > TCode_break

TFrame GetFrame(void) const

Get the Frame member data.

TConflict & SetConflict(void)

Assign a value to Conflict data member.

const TCode & GetCode(void) const

Get the Code member data.

bool CanGetCode_break(void) const

Check if it is safe to call GetCode_break method.

Tparent::CMemberIndex< E_memberIndex, 9 > TmemberIndex

void ResetFrame(void)

Reset Frame data member.

void ResetConflict(void)

Reset Conflict data member.

TFrame & SetFrame(void)

Assign a value to Frame data member.

list< CRef< CCode_break > > m_Code_break

TCode_break & SetCode_break(void)

Assign a value to Code_break data member.

bool CanGetStops(void) const

Check if it is safe to call GetStops method.

bool IsSetStops(void) const

number of stop codons on above Check if a value has been assigned to Stops data member.

TMismatch GetMismatch(void) const

Get the Mismatch member data.

bool CanGetFrame(void) const

Check if it is safe to call GetFrame method.

bool CanGetOrf(void) const

Check if it is safe to call GetOrf method.

bool CanGetMismatch(void) const

Check if it is safe to call GetMismatch method.

bool CanGetCode(void) const

Check if it is safe to call GetCode method.

TStops & SetStops(void)

Assign a value to Stops data member.

TMismatch & SetMismatch(void)

Assign a value to Mismatch data member.

bool IsSetGaps(void) const

number of gaps on conflict/except Check if a value has been assigned to Gaps data member.

void ResetOrf(void)

Reset Orf data member.

CCdregion_Base & operator=(const CCdregion_Base &)

void ResetStops(void)

Reset Stops data member.

bool CanGetGaps(void) const

Check if it is safe to call GetGaps method.

const TCode_break & GetCode_break(void) const

Get the Code_break member data.

bool IsSetMismatch(void) const

number of mismatches on above Check if a value has been assigned to Mismatch data member.

TOrf & SetOrf(void)

Assign a value to Orf data member.

TConflict GetConflict(void) const

Get the Conflict member data.

bool IsSetCode_break(void) const

individual exceptions Check if a value has been assigned to Code_break data member.

bool IsSetFrame(void) const

Check if a value has been assigned to Frame data member.

@ eFrame_not_set

not set, code uses one

const GenericPointer< typename T::ValueType > T2 value

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