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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/Cdd__descr___8cpp_source.html below:

NCBI C++ ToolKit: src/objects/cdd/Cdd_descr_.cpp Source File

->CodeVersion(22400);

->DataSpec(ncbi::EDataSpec::eASN);

User-defined methods of the data storage class.

User-defined methods of the data storage class.

BEGIN_NAMED_BASE_CHOICE_INFO("Cdd-descr", CCdd_descr)

BEGIN_NAMED_ENUM_IN_INFO("", CCdd_descr_Base::, EStatus, true)

User-defined methods of the data storage class.

User-defined methods of the data storage class.

The description of CDD's refers to the specific set of aligned sequences, the region that is being al...

#define DIAG_COMPILE_INFO

Make compile time diagnostic information object to use in CNcbiDiag and CException.

#define SET_ENUM_INTERNAL_NAME(OwnerName, MemberName)

#define SET_ENUM_MODULE(ModuleName)

#define ADD_NAMED_REF_CHOICE_VARIANT(MemberAlias, MemberName, ClassName)

#define ADD_ENUM_VALUE(EnumValueName, EnumValueValue)

#define ADD_NAMED_ENUM_CHOICE_VARIANT(MemberAlias, MemberName, EnumName)

#define SET_CHOICE_MODULE(ModuleName)

#define ADD_NAMED_BUF_CHOICE_VARIANT(MemberAlias, MemberName, TypeMacro, TypeMacroArgs)

void AddReference(void) const

Add reference to object.

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

const TTax_source & GetTax_source(void) const

Get the variant data.

E_Choice

Choice variants.

TReadonly_status m_Readonly_status

NCBI_NS_NCBI::CSerialObject * m_object

const TRepeats & GetRepeats(void) const

Get the variant data.

static const char *const sm_SelectionNames[]

void CheckSelected(E_Choice index) const

Verify selection, throw exception if it differs from the expected.

const TCreate_date & GetCreate_date(void) const

Get the variant data.

TCreate_date & SetCreate_date(void)

Select the variant.

TTax_source & SetTax_source(void)

Select the variant.

TTitle & SetTitle(void)

Select the variant.

void ThrowInvalidSelection(E_Choice index) const

Throw 'InvalidSelection' exception.

TOld_root & SetOld_root(void)

Select the variant.

static string SelectionName(E_Choice index)

Retrieve selection name (for diagnostic purposes).

TUpdate_date & SetUpdate_date(void)

Select the variant.

TCuration_status m_Curation_status

void Select(E_Choice index, EResetVariant reset=eDoResetVariant)

Select the requested variant if needed.

TRepeats & SetRepeats(void)

Select the variant.

TAttribution & SetAttribution(void)

Select the variant.

TReference & SetReference(void)

Select the variant.

void DoSelect(E_Choice index, CObjectMemoryPool *pool=0)

virtual void ResetSelection(void)

Reset the selection (set it to e_not_set).

virtual ~CCdd_descr_Base(void)

NCBI_NS_NCBI::CUnionBuffer< TScrapbook > m_Scrapbook

const TSource_id & GetSource_id(void) const

Get the variant data.

TSource_id & SetSource_id(void)

Select the variant.

TComment & SetComment(void)

Select the variant.

const TBook_ref & GetBook_ref(void) const

Get the variant data.

TOthername & SetOthername(void)

Select the variant.

NCBI_NS_NCBI::CUnionBuffer< NCBI_NS_STD::string > m_string

const TOld_root & GetOld_root(void) const

Get the variant data.

virtual void Reset(void)

Reset the whole object.

TBook_ref & SetBook_ref(void)

Select the variant.

const TAttribution & GetAttribution(void) const

Get the variant data.

const TUpdate_date & GetUpdate_date(void) const

Get the variant data.

const TReference & GetReference(void) const

Get the variant data.

TCategory & SetCategory(void)

Select the variant.

TSource & SetSource(void)

Select the variant.

@ e_Repeats

to record repeat counts

@ e_Title

hold short descriptive text

@ e_Comment

this is where descriptions go

@ e_Reference

a citation describing the domain

@ e_Source_id

for linking back to source db

@ e_Othername

alternative names for the CDD if domain has several common names

@ e_not_set

No variant selected.

@ e_Book_ref

links to Entrez/books

@ e_Update_date

Date of last version change.

@ e_Scrapbook

for storing curation notes those won't make it into public distributions

@ e_Source

the database the seeds were created from, e.g. SMART, PFAM, etc..

@ e_Category

intracellular, extracellular, etc. to record spatial and/or temporal expression in free-text format

@ e_Attribution

add citations and/or author names

@ e_Tax_source

holds the highest common tax node

@ e_Old_root

to record short-term history

@ e_Create_date

Date of first creation/dump.

const GenericPointer< typename T::ValueType > T2 value

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