Home - News ( United States | United Kingdom | Italy | Germany ) - Football scores

Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/Cdd___8hpp_source.html below:

NCBI C++ ToolKit: include/objects/cdd/Cdd_.hpp Source File

IsSetName(

)

;

CanGetName(

)

;

ResetName(

);

& GetName(

)

;

& SetName(

);

IsSetId(

)

;

CanGetId(

)

;

ResetId(

);

IsSetDescription(

)

;

CanGetDescription(

)

;

ResetDescription(

);

IsSetSeqannot(

)

;

CanGetSeqannot(

)

;

ResetSeqannot(

);

& GetSeqannot(

)

;

IsSetFeatures(

)

;

CanGetFeatures(

)

;

ResetFeatures(

);

& GetFeatures(

)

;

IsSetSequences(

)

;

CanGetSequences(

)

;

ResetSequences(

);

& GetSequences(

)

;

IsSetProfile_range(

)

;

CanGetProfile_range(

)

;

ResetProfile_range(

);

IsSetTrunc_master(

)

;

CanGetTrunc_master(

)

;

ResetTrunc_master(

);

IsSetPosfreq(

)

;

CanGetPosfreq(

)

;

ResetPosfreq(

);

& GetPosfreq(

)

;

IsSetScoremat(

)

;

CanGetScoremat(

)

;

ResetScoremat(

);

& GetScoremat(

)

;

IsSetDistance(

)

;

CanGetDistance(

)

;

ResetDistance(

);

& GetDistance(

)

;

IsSetParent(

)

;

CanGetParent(

)

;

ResetParent(

);

& GetParent(

)

;

IsSetChildren(

)

;

CanGetChildren(

)

;

ResetChildren(

);

& GetChildren(

)

;

IsSetSiblings(

)

;

CanGetSiblings(

)

;

ResetSiblings(

);

& GetSiblings(

)

;

IsSetNeighbors(

)

;

CanGetNeighbors(

)

;

ResetNeighbors(

);

& GetNeighbors(

)

;

IsSetPending(

)

;

CanGetPending(

)

;

ResetPending(

);

& GetPending(

)

;

IsSetRejects(

)

;

CanGetRejects(

)

;

ResetRejects(

);

& GetRejects(

)

;

IsSetMaster3d(

)

;

CanGetMaster3d(

)

;

ResetMaster3d(

);

& GetMaster3d(

)

;

IsSetAlignannot(

)

;

CanGetAlignannot(

)

;

ResetAlignannot(

);

IsSetStyle_dictionary(

)

;

CanGetStyle_dictionary(

)

;

ResetStyle_dictionary(

);

IsSetUser_annotations(

)

;

CanGetUser_annotations(

)

;

ResetUser_annotations(

);

IsSetAncestors(

)

;

CanGetAncestors(

)

;

ResetAncestors(

);

& GetAncestors(

)

;

IsSetScoreparams(

)

;

CanGetScoreparams(

)

;

ResetScoreparams(

);

IsSetSeqtree(

)

;

CanGetSeqtree(

)

;

ResetSeqtree(

);

& GetSeqtree(

)

;

Reset(

);

.NotEmpty();

the Cdd is the basic ASN.1 object storing an annotated and curated set of alignments (formulated as a...

CCn3d_style_dictionary –.

CCn3d_user_annotations –.

Base class for all serializable objects.

void ThrowUnassigned(TMemberIndex index) const

static string UnassignedString(void)

const CSeq_id & GetId(const CSeq_loc &loc, CScope *scope)

If all CSeq_ids embedded in CSeq_loc refer to the same CBioseq, returns the first CSeq_id found,...

uint32_t Uint4

4-byte (32-bit) unsigned integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

bool CanGetSequences(void) const

Check if it is safe to call GetSequences method.

const TSequences & GetSequences(void) const

Get the Sequences member data.

bool IsSetStyle_dictionary(void) const

record rendering styles Check if a value has been assigned to Style_dictionary data member.

CAlign_annot_set TAlignannot

bool IsSetPending(void) const

contains alignments from update or "lower panel" Check if a value has been assigned to Pending data m...

CSeq_interval TProfile_range

const TScoremat & GetScoremat(void) const

Get the Scoremat member data.

bool IsSetSequences(void) const

store as bioseq-set inside seq-entry Check if a value has been assigned to Sequences data member.

list< CRef< CSeq_annot > > m_Seqannot

bool CanGetDistance(void) const

Check if it is safe to call GetDistance method.

bool CanGetChildren(void) const

Check if it is safe to call GetChildren method.

const TTrunc_master & GetTrunc_master(void) const

Get the Trunc_master member data.

const TId & GetId(void) const

Get the Id member data.

bool CanGetMaster3d(void) const

Check if it is safe to call GetMaster3d method.

bool IsSetRejects(void) const

SeqIds of rejected CD- members, ignore in update Check if a value has been assigned to Rejects data m...

CRef< TDescription > m_Description

bool IsSetSeqannot(void) const

contains the CD alignment Check if a value has been assigned to Seqannot data member.

bool IsSetUser_annotations(void) const

user annotations in Cn3D Check if a value has been assigned to User_annotations data member.

list< CRef< CSeq_annot > > TSeqannot

Tparent::CMemberIndex< E_memberIndex, 25 > TmemberIndex

TId & SetId(void)

Assign a value to Id data member.

const TScoreparams & GetScoreparams(void) const

Get the Scoreparams member data.

CRef< TTrunc_master > m_Trunc_master

const TMaster3d & GetMaster3d(void) const

Get the Master3d member data.

const TNeighbors & GetNeighbors(void) const

Get the Neighbors member data.

list< CRef< CSeq_id > > TMaster3d

bool CanGetParent(void) const

Check if it is safe to call GetParent method.

const TPosfreq & GetPosfreq(void) const

Get the Posfreq member data.

bool CanGetId(void) const

Check if it is safe to call GetId method.

bool IsSetDescription(void) const

status, references, etc.

list< CRef< CUpdate_align > > m_Pending

TMaster3d & SetMaster3d(void)

Assign a value to Master3d data member.

bool IsSetAlignannot(void) const

alignment annotation Check if a value has been assigned to Alignannot data member.

list< CRef< CUpdate_align > > TPending

bool CanGetNeighbors(void) const

Check if it is safe to call GetNeighbors method.

const TUser_annotations & GetUser_annotations(void) const

Get the User_annotations member data.

TAncestors & SetAncestors(void)

Assign a value to Ancestors data member.

CRef< TDistance > m_Distance

CRef< TPosfreq > m_Posfreq

const TRejects & GetRejects(void) const

Get the Rejects member data.

bool CanGetSeqtree(void) const

Check if it is safe to call GetSeqtree method.

const TAncestors & GetAncestors(void) const

Get the Ancestors member data.

bool IsSetChildren(void) const

this CD has been split, not used Check if a value has been assigned to Children data member.

bool IsSetPosfreq(void) const

relative residue frequencies Check if a value has been assigned to Posfreq data member.

TPending & SetPending(void)

Assign a value to Pending data member.

bool CanGetName(void) const

Check if it is safe to call GetName method.

list< CRef< CReject_id > > TRejects

bool CanGetFeatures(void) const

Check if it is safe to call GetFeatures method.

bool IsSetName(void) const

a short name (can be the accession..) Check if a value has been assigned to Name data member.

bool IsSetMaster3d(void) const

record if CD has a 3D representative Check if a value has been assigned to Master3d data member.

const TPending & GetPending(void) const

Get the Pending member data.

CCn3d_user_annotations TUser_annotations

bool IsSetDistance(void) const

pairwise distances for all seqs.

bool CanGetSiblings(void) const

Check if it is safe to call GetSiblings method.

bool IsSetTrunc_master(void) const

holds the truncated master, which may be something like a consensus, uses the same sequence coordinat...

const TDistance & GetDistance(void) const

Get the Distance member data.

CRef< TNeighbors > m_Neighbors

bool IsSetAncestors(void) const

list of parents Check if a value has been assigned to Ancestors data member.

bool IsSetScoreparams(void) const

Check if a value has been assigned to Scoreparams data member.

bool IsSetSeqtree(void) const

Check if a value has been assigned to Seqtree data member.

bool CanGetPending(void) const

Check if it is safe to call GetPending method.

bool IsSetScoremat(void) const

Position dependent score matrix Check if a value has been assigned to Scoremat data member.

CCdd_descr_set TDescription

CRef< TSiblings > m_Siblings

CCdd_Base & operator=(const CCdd_Base &)

CRef< TUser_annotations > m_User_annotations

void ResetId(void)

Reset Id data member.

bool IsSetSiblings(void) const

related CDs (common hits), clusters Check if a value has been assigned to Siblings data member.

const TAlignannot & GetAlignannot(void) const

Get the Alignannot member data.

bool CanGetPosfreq(void) const

Check if it is safe to call GetPosfreq method.

const TSeqannot & GetSeqannot(void) const

Get the Seqannot member data.

TRejects & SetRejects(void)

Assign a value to Rejects data member.

bool CanGetAlignannot(void) const

Check if it is safe to call GetAlignannot method.

bool CanGetRejects(void) const

Check if it is safe to call GetRejects method.

CRef< TSeqtree > m_Seqtree

TSeqannot & SetSeqannot(void)

Assign a value to Seqannot data member.

bool CanGetDescription(void) const

Check if it is safe to call GetDescription method.

list< CRef< CDomain_parent > > TAncestors

CCdd_Base(const CCdd_Base &)

DECLARE_INTERNAL_TYPE_INFO()

CRef< TFeatures > m_Features

CRef< TAlignannot > m_Alignannot

bool IsSetId(void) const

this CD's Ids Check if a value has been assigned to Id data member.

CCn3d_style_dictionary TStyle_dictionary

bool CanGetSeqannot(void) const

Check if it is safe to call GetSeqannot method.

bool CanGetStyle_dictionary(void) const

Check if it is safe to call GetStyle_dictionary method.

bool IsSetNeighbors(void) const

co-occurring CDs, not used Check if a value has been assigned to Neighbors data member.

bool CanGetAncestors(void) const

Check if it is safe to call GetAncestors method.

const TChildren & GetChildren(void) const

Get the Children member data.

list< CRef< CSeq_id > > m_Master3d

const TSeqtree & GetSeqtree(void) const

Get the Seqtree member data.

bool IsSetProfile_range(void) const

profile for this region only also stores the Seq-id of the master Check if a value has been assigned ...

CRef< TSequences > m_Sequences

const TDescription & GetDescription(void) const

Get the Description member data.

bool CanGetScoreparams(void) const

Check if it is safe to call GetScoreparams method.

const TParent & GetParent(void) const

Get the Parent member data.

CBiostruc_annot_set TFeatures

CPssmWithParameters TScoreparams

CRef< TStyle_dictionary > m_Style_dictionary

bool CanGetProfile_range(void) const

Check if it is safe to call GetProfile_range method.

CRef< TChildren > m_Children

const TName & GetName(void) const

Get the Name member data.

bool CanGetUser_annotations(void) const

Check if it is safe to call GetUser_annotations method.

bool IsSetParent(void) const

this CD is the result of a split Check if a value has been assigned to Parent data member.

const TProfile_range & GetProfile_range(void) const

Get the Profile_range member data.

CRef< TScoremat > m_Scoremat

bool IsSetFeatures(void) const

contains structure alignment data or "core" definitions Check if a value has been assigned to Feature...

const TSiblings & GetSiblings(void) const

Get the Siblings member data.

bool CanGetTrunc_master(void) const

Check if it is safe to call GetTrunc_master method.

list< CRef< CDomain_parent > > m_Ancestors

CRef< TProfile_range > m_Profile_range

TName & SetName(void)

Assign a value to Name data member.

list< CRef< CReject_id > > m_Rejects

CRef< TScoreparams > m_Scoreparams

const TFeatures & GetFeatures(void) const

Get the Features member data.

const TStyle_dictionary & GetStyle_dictionary(void) const

Get the Style_dictionary member data.

bool CanGetScoremat(void) const

Check if it is safe to call GetScoremat method.

const GenericPointer< typename T::ValueType > T2 value

RetroSearch is an open source project built by @garambo | Open a GitHub Issue

Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo

HTML: 3.2 | Encoding: UTF-8 | Version: 0.7.4