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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/Bioseq__set___8hpp_source.html below:

NCBI C++ ToolKit: include/objects/seqset/Bioseq_set_.hpp Source File

eClass_swissprot = 11,

eClass_pdb_entry = 12,

eClass_gen_prod_set = 17,

eClass_named_annot = 19,

eClass_named_annot_prod = 20,

eClass_read_set = 21,

eClass_paired_end_reads = 22,

eClass_small_genome_set = 23,

list< CRef< CSeq_annot > >

;

IsSetId(

)

;

CanGetId(

)

;

ResetId(

);

IsSetColl(

)

;

CanGetColl(

)

;

ResetColl(

);

& GetColl(

)

;

& SetColl(

);

IsSetLevel(

)

;

CanGetLevel(

)

;

ResetLevel(

);

GetLevel(

)

;

& SetLevel(

);

IsSetClass(

)

;

CanGetClass(

)

;

ResetClass(

);

SetDefaultClass(

);

GetClass(

)

;

& SetClass(

);

IsSetRelease(

)

;

CanGetRelease(

)

;

ResetRelease(

);

& GetRelease(

)

;

IsSetDate(

)

;

CanGetDate(

)

;

ResetDate(

);

& GetDate(

)

;

& SetDate(

);

IsSetDescr(

)

;

CanGetDescr(

)

;

ResetDescr(

);

& GetDescr(

)

;

& SetDescr(

);

IsSetSeq_set(

)

;

CanGetSeq_set(

)

;

ResetSeq_set(

);

& GetSeq_set(

)

;

IsSetAnnot(

)

;

CanGetAnnot(

)

;

ResetAnnot(

);

& GetAnnot(

)

;

& SetAnnot(

);

Reset(

);

.NotEmpty();

.NotEmpty();

.NotEmpty();

*** Sequence Collections ******************************** * just a collection

@Seq_descr.hpp User-defined methods of the data storage class.

Base class for all serializable objects.

static char UnassignedByte(void)

void ThrowUnassigned(TMemberIndex index) const

#define ENUM_METHOD_NAME(EnumName)

static string UnassignedString(void)

const CSeq_id & GetId(const CSeq_loc &loc, CScope *scope)

If all CSeq_ids embedded in CSeq_loc refer to the same CBioseq, returns the first CSeq_id found,...

uint32_t Uint4

4-byte (32-bit) unsigned integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_SEQSET_EXPORT

CBioseq_set_Base & operator=(const CBioseq_set_Base &)

bool IsSetClass(void) const

Check if a value has been assigned to Class data member.

bool CanGetRelease(void) const

Check if it is safe to call GetRelease method.

Tparent::CMemberIndex< E_memberIndex, 10 > TmemberIndex

const TDescr & GetDescr(void) const

Get the Descr member data.

list< CRef< CSeq_entry > > m_Seq_set

TRelease & SetRelease(void)

Assign a value to Release data member.

bool CanGetDescr(void) const

Check if it is safe to call GetDescr method.

bool IsSetColl(void) const

to identify a collection Check if a value has been assigned to Coll data member.

bool CanGetAnnot(void) const

Check if it is safe to call GetAnnot method.

bool CanGetSeq_set(void) const

Check if it is safe to call GetSeq_set method.

void SetDefaultClass(void)

Assign default value to Class data member.

bool CanGetDate(void) const

Check if it is safe to call GetDate method.

TClass GetClass(void) const

Get the Class member data.

bool IsSetDate(void) const

Check if a value has been assigned to Date data member.

bool IsSetRelease(void) const

Check if a value has been assigned to Release data member.

TAnnot & SetAnnot(void)

Assign a value to Annot data member.

list< CRef< CSeq_annot > > m_Annot

bool IsSetAnnot(void) const

Check if a value has been assigned to Annot data member.

void ResetLevel(void)

Reset Level data member.

bool IsSetId(void) const

Check if a value has been assigned to Id data member.

bool IsSetSeq_set(void) const

Check if a value has been assigned to Seq_set data member.

DECLARE_INTERNAL_TYPE_INFO()

const TRelease & GetRelease(void) const

Get the Release member data.

bool IsSetLevel(void) const

nesting level Check if a value has been assigned to Level data member.

bool IsSetDescr(void) const

Check if a value has been assigned to Descr data member.

void ResetClass(void)

Reset Class data member.

const TDate & GetDate(void) const

Get the Date member data.

bool CanGetClass(void) const

Check if it is safe to call GetClass method.

list< CRef< CSeq_annot > > TAnnot

TLevel & SetLevel(void)

Assign a value to Level data member.

const TSeq_set & GetSeq_set(void) const

Get the Seq_set member data.

const TAnnot & GetAnnot(void) const

Get the Annot member data.

CBioseq_set_Base(const CBioseq_set_Base &)

bool CanGetColl(void) const

Check if it is safe to call GetColl method.

const TColl & GetColl(void) const

Get the Coll member data.

bool CanGetLevel(void) const

Check if it is safe to call GetLevel method.

TClass & SetClass(void)

Assign a value to Class data member.

list< CRef< CSeq_entry > > TSeq_set

bool CanGetId(void) const

Check if it is safe to call GetId method.

TSeq_set & SetSeq_set(void)

Assign a value to Seq_set data member.

const TId & GetId(void) const

Get the Id member data.

TLevel GetLevel(void) const

Get the Level member data.

const GenericPointer< typename T::ValueType > T2 value

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