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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/BioSource___8hpp_source.html below:

NCBI C++ ToolKit: include/objects/seqfeat/BioSource_.hpp Source File

eGenome_chloroplast = 2,

eGenome_chromoplast = 3,

eGenome_kinetoplast = 4,

eGenome_mitochondrion = 5,

eGenome_macronuclear = 7,

eGenome_extrachrom = 8,

eGenome_transposon = 10,

eGenome_insertion_seq = 11,

eGenome_cyanelle = 12,

eGenome_proviral = 13,

eGenome_nucleomorph = 15,

eGenome_apicoplast = 16,

eGenome_leucoplast = 17,

eGenome_proplastid = 18,

eGenome_endogenous_virus = 19,

eGenome_hydrogenosome = 20,

eGenome_chromosome = 21,

eGenome_chromatophore = 22,

eGenome_plasmid_in_mitochondrion = 23,

eGenome_plasmid_in_plastid = 24

eOrigin_artificial = 4,

eOrigin_synthetic = 5,

IsSetGenome(

)

;

CanGetGenome(

)

;

ResetGenome(

);

SetDefaultGenome(

);

GetGenome(

)

;

IsSetOrigin(

)

;

CanGetOrigin(

)

;

ResetOrigin(

);

SetDefaultOrigin(

);

GetOrigin(

)

;

IsSetOrg(

)

;

CanGetOrg(

)

;

ResetOrg(

);

& GetOrg(

)

;

& SetOrg(

);

IsSetSubtype(

)

;

CanGetSubtype(

)

;

ResetSubtype(

);

IsSetIs_focus(

)

;

CanGetIs_focus(

)

;

ResetIs_focus(

);

SetIs_focus(

);

IsSetPcr_primers(

)

;

CanGetPcr_primers(

)

;

ResetPcr_primers(

);

Reset(

);

.NotEmpty();

********************************************************************

Base class for all serializable objects.

int GetSubtype(CFieldNamePanel *field_name_panel, string &ncRNA_class)

static char UnassignedByte(void)

void ThrowUnassigned(TMemberIndex index) const

#define ENUM_METHOD_NAME(EnumName)

uint32_t Uint4

4-byte (32-bit) unsigned integer

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

#define NCBI_SEQFEAT_EXPORT

const TSubtype & GetSubtype(void) const

Get the Subtype member data.

const TPcr_primers & GetPcr_primers(void) const

Get the Pcr_primers member data.

TGenome GetGenome(void) const

Get the Genome member data.

TOrigin GetOrigin(void) const

Get the Origin member data.

void ResetGenome(void)

Reset Genome data member.

void ResetOrigin(void)

Reset Origin data member.

bool CanGetSubtype(void) const

Check if it is safe to call GetSubtype method.

bool IsSetOrg(void) const

Check if a value has been assigned to Org data member.

bool CanGetOrg(void) const

Check if it is safe to call GetOrg method.

CPCRReactionSet TPcr_primers

list< CRef< CSubSource > > TSubtype

DECLARE_INTERNAL_TYPE_INFO()

bool IsSetSubtype(void) const

Check if a value has been assigned to Subtype data member.

TGenome & SetGenome(void)

Assign a value to Genome data member.

bool IsSetPcr_primers(void) const

Check if a value has been assigned to Pcr_primers data member.

void SetIs_focus(void)

Set NULL data member (assign 'NULL' value to Is_focus data member).

void ResetIs_focus(void)

Reset Is_focus data member.

bool CanGetGenome(void) const

Check if it is safe to call GetGenome method.

bool CanGetOrigin(void) const

Check if it is safe to call GetOrigin method.

const TOrg & GetOrg(void) const

Get the Org member data.

bool IsSetOrigin(void) const

Check if a value has been assigned to Origin data member.

TOrg & SetOrg(void)

Assign a value to Org data member.

bool CanGetPcr_primers(void) const

Check if it is safe to call GetPcr_primers method.

bool CanGetIs_focus(void) const

Check if value of Is_focus member is getatable.

CBioSource_Base(const CBioSource_Base &)

bool IsSetGenome(void) const

Check if a value has been assigned to Genome data member.

list< CRef< CSubSource > > m_Subtype

CRef< TPcr_primers > m_Pcr_primers

void ResetOrg(void)

Reset Org data member.

void SetDefaultOrigin(void)

Assign default value to Origin data member.

bool IsSetIs_focus(void) const

to distinguish biological focus Check if a value has been assigned to Is_focus data member.

void SetDefaultGenome(void)

Assign default value to Genome data member.

TOrigin & SetOrigin(void)

Assign a value to Origin data member.

Tparent::CMemberIndex< E_memberIndex, 7 > TmemberIndex

EGenome

biological context

TSubtype & SetSubtype(void)

Assign a value to Subtype data member.

CBioSource_Base & operator=(const CBioSource_Base &)

const GenericPointer< typename T::ValueType > T2 value

void SetGenome(CRef< objects::CSeq_entry > entry, objects::CBioSource::TGenome genome)

void SetOrigin(CRef< objects::CSeq_entry > entry, objects::CBioSource::TOrigin origin)

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