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Showing content from http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/doxyhtml/Annotdesc___8hpp_source.html below:

NCBI C++ ToolKit: include/objects/seq/Annotdesc_.hpp Source File

41 #ifndef OBJECTS_SEQ_ANNOTDESC_BASE_HPP 42 #define OBJECTS_SEQ_ANNOTDESC_BASE_HPP 52 #ifndef BEGIN_objects_SCOPE 53 # define BEGIN_objects_SCOPE BEGIN_SCOPE(objects) 54 # define END_objects_SCOPE END_SCOPE(objects) 114  virtual void

Reset(

void

);

117  virtual void

ResetSelection(

void

);

123 

E_Choice Which(

void

)

const

;

129  void

CheckSelected(E_Choice index)

const

;

135 

NCBI_NORETURN

void

ThrowInvalidSelection(E_Choice index)

const

;

143  static string

SelectionName(E_Choice index);

182  bool

IsName(

void

)

const

;

188  const TName

& GetName(

void

)

const

;

194  TName

& SetName(

void

);

209  bool

IsTitle(

void

)

const

;

236  bool

IsComment(

void

)

const

;

242  const TComment

& GetComment(

void

)

const

;

263  bool

IsPub(

void

)

const

;

269  const TPub

& GetPub(

void

)

const

;

275  TPub

& SetPub(

void

);

289  bool

IsUser(

void

)

const

;

295  const TUser

& GetUser(

void

)

const

;

301  TUser

& SetUser(

void

);

315  bool

IsCreate_date(

void

)

const

;

341  bool

IsUpdate_date(

void

)

const

;

367  bool

IsSrc(

void

)

const

;

373  const TSrc

& GetSrc(

void

)

const

;

379  TSrc

& SetSrc(

void

);

393  bool

IsAlign(

void

)

const

;

399  const TAlign

& GetAlign(

void

)

const

;

405  TAlign

& SetAlign(

void

);

419  bool

IsRegion(

void

)

const

;

425  const TRegion

& GetRegion(

void

)

const

;

448  static const char

*

const

sm_SelectionNames[];

451

NCBI_NS_NCBI::CUnionBuffer<NCBI_NS_STD::string>

m_string

;

@Pubdesc.hpp User-defined methods of the data storage class.

Base class for all serializable objects.

NCBI_XOBJUTIL_EXPORT string GetTitle(const CBioseq_Handle &hnd, TGetTitleFlags flags=0)

#define END_NCBI_SCOPE

End previously defined NCBI scope.

#define BEGIN_NCBI_SCOPE

Define ncbi namespace.

TTitle & SetTitle(void)

Select the variant.

bool IsCreate_date(void) const

Check if variant Create_date is selected.

void CheckSelected(E_Choice index) const

Verify selection, throw exception if it differs from the expected.

E_ChoiceStopper

Maximum+1 value of the choice variant enumerator.

void ThrowInvalidSelection(E_Choice index) const

Throw 'InvalidSelection' exception.

void Select(E_Choice index, EResetVariant reset, CObjectMemoryPool *pool)

Select the requested variant if needed, allocating CObject variants from memory pool.

TName & SetName(void)

Select the variant.

E_Choice Which(void) const

Which variant is currently selected.

NCBI_NS_NCBI::CUnionBuffer< NCBI_NS_STD::string > m_string

TComment & SetComment(void)

Select the variant.

bool IsComment(void) const

Check if variant Comment is selected.

bool IsRegion(void) const

Check if variant Region is selected.

void Select(E_Choice index, EResetVariant reset=eDoResetVariant)

Select the requested variant if needed.

DECLARE_INTERNAL_TYPE_INFO()

bool IsUpdate_date(void) const

Check if variant Update_date is selected.

void DoSelect(E_Choice index, CObjectMemoryPool *pool=0)

virtual void ResetSelection(void)

Reset the selection (set it to e_not_set).

bool IsUser(void) const

Check if variant User is selected.

NCBI_NS_NCBI::CSerialObject * m_object

E_Choice

Choice variants.

const TTitle & GetTitle(void) const

Get the variant data.

bool IsSrc(void) const

Check if variant Src is selected.

NCBI_NS_NCBI::CUnionBuffer< NCBI_NS_STD::string > m_string

CAnnotdesc_Base(const CAnnotdesc_Base &)

CAnnotdesc_Base & operator=(const CAnnotdesc_Base &)

const TComment & GetComment(void) const

Get the variant data.

bool IsTitle(void) const

Check if variant Title is selected.

const TName & GetName(void) const

Get the variant data.

bool IsPub(void) const

Check if variant Pub is selected.

bool IsAlign(void) const

Check if variant Align is selected.

bool IsName(void) const

Check if variant Name is selected.

@ e_Comment

a more extensive comment

@ e_Pub

a reference to the publication

@ e_Align

definition of the SeqAligns

@ e_Region

all contents cover this region

@ e_Update_date

date of last update

@ e_Create_date

date entry first created/released

@ e_Name

a short name for this collection

@ e_Title

a title for this collection

@ e_User

user defined object

@ e_Src

source sequence from which annot came

@ e_not_set

No variant selected.

const GenericPointer< typename T::ValueType > T2 value

static void SetTitle(CRef< CSeq_entry > entry, string title)


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