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Bioconductor - MultiDataSet (development version)

MultiDataSet

This is the development version of MultiDataSet; for the stable release version, see MultiDataSet.

Implementation of MultiDataSet and ResultSet

Bioconductor version: Development (3.22)

Implementation of the BRGE's (Bioinformatic Research Group in Epidemiology from Center for Research in Environmental Epidemiology) MultiDataSet and ResultSet. MultiDataSet is designed for integrating multi omics data sets and ResultSet is a container for omics results. This package contains base classes for MEAL and rexposome packages.

Author: Carlos Ruiz-Arenas [aut, cre], Carles Hernandez-Ferrer [aut], Juan R. Gonzalez [aut]

Maintainer: Xavier Escrib<c3><a0> Montagut <xavier.escriba at isglobal.org>

Citation (from within R, enter citation("MultiDataSet")): Installation

To install this package, start R (version "4.5") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("MultiDataSet")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MultiDataSet")
Details biocViews DataRepresentation, Software Version 1.37.0 In Bioconductor since BioC 3.3 (R-3.3) (9 years) License file LICENSE Depends R (>= 4.1), Biobase Imports BiocGenerics, GenomicRanges, IRanges, S4Vectors, SummarizedExperiment, methods, utils, ggplot2, ggrepel, qqman, limma System Requirements URL See More Suggests brgedata, minfi, minfiData, knitr, rmarkdown, testthat, omicade4, iClusterPlus, GEOquery, MultiAssayExperiment, BiocStyle, RaggedExperiment Linking To Enhances Depends On Me MEAL Imports Me biosigner, omicRexposome, phenomis, ropls Suggests Me Links To Me Build Report Build Report Package Archives

Follow Installation instructions to use this package in your R session.

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