This is the development version of MsExperiment; for the stable release version, see MsExperiment.
Infrastructure for Mass Spectrometry ExperimentsBioconductor version: Development (3.22)
Infrastructure to store and manage all aspects related to a complete proteomics or metabolomics mass spectrometry (MS) experiment. The MsExperiment package provides light-weight and flexible containers for MS experiments building on the new MS infrastructure provided by the Spectra, QFeatures and related packages. Along with raw data representations, links to original data files and sample annotations, additional metadata or annotations can also be stored within the MsExperiment container. To guarantee maximum flexibility only minimal constraints are put on the type and content of the data within the containers.
Author: Laurent Gatto [aut, cre] ORCID: 0000-0002-1520-2268 , Johannes Rainer [aut] ORCID: 0000-0002-6977-7147 , Sebastian Gibb [aut] ORCID: 0000-0001-7406-4443 , Tuomas Borman [ctb] ORCID: 0000-0002-8563-8884
Maintainer: Laurent Gatto <laurent.gatto at uclouvain.be>
Citation (from within R, entercitation("MsExperiment")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("MsExperiment")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MsExperiment")Follow Installation instructions to use this package in your R session.
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