This is the development version of rawDiag; for the stable release version, see rawDiag.
Brings Orbitrap Mass Spectrometry Data to Life; Fast and ColorfulBioconductor version: Development (3.22)
Optimizing methods for liquid chromatography coupled to mass spectrometry (LC-MS) poses a nontrivial challenge. The rawDiag package facilitates rational method optimization by generating MS operator-tailored diagnostic plots of scan-level metadata. The package is designed for use on the R shell or as a Shiny application on the Orbitrap instrument PC.
Author: Christian Panse [aut, cre] ORCID: 0000-0003-1975-3064 , Christian Trachsel [aut], Tobias Kockmann [aut]
Maintainer: Christian Panse <cp at fgcz.ethz.ch>
Citation (from within R, entercitation("rawDiag")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("rawDiag")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("rawDiag")Follow Installation instructions to use this package in your R session.
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