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Bioconductor - ndexr (development version)

This is the development version of ndexr; for the stable release version, see ndexr.

Bioconductor version: Development (3.22)

This package offers an interface to NDEx servers, e.g. the public server at http://ndexbio.org/. It can retrieve and save networks via the API. Networks are offered as RCX object and as igraph representation.

Author: Florian Auer [cre, aut] ORCID: 0000-0002-5320-8900 , Frank Kramer [ctb], Alex Ishkin [ctb], Dexter Pratt [ctb]

Maintainer: Florian Auer <florian.auer at informatik.uni-augsburg.de>

To install this package, start R (version "4.5") and enter:

if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("ndexr")

For older versions of R, please refer to the appropriate Bioconductor release.

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ndexr")

Follow Installation instructions to use this package in your R session.

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