This is the development version of loci2path; for the stable release version, see loci2path.
Loci2path: regulatory annotation of genomic intervals based on tissue-specific expression QTLsBioconductor version: Development (3.22)
loci2path performs statistics-rigorous enrichment analysis of eQTLs in genomic regions of interest. Using eQTL collections provided by the Genotype-Tissue Expression (GTEx) project and pathway collections from MSigDB.
Author: Tianlei Xu
Maintainer: Tianlei Xu <tianlei.xu at emory.edu>
Citation (from within R, entercitation("loci2path")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("loci2path")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("loci2path")Follow Installation instructions to use this package in your R session.
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