This is the development version of SynMut; for the stable release version, see SynMut.
SynMut: Designing Synonymously Mutated Sequences with Different Genomic SignaturesBioconductor version: Development (3.22)
There are increasing demands on designing virus mutants with specific dinucleotide or codon composition. This tool can take both dinucleotide preference and/or codon usage bias into account while designing mutants. It is a powerful tool for in silico designs of DNA sequence mutants.
Author: Haogao Gu [aut, cre], Leo L.M. Poon [led]
Maintainer: Haogao Gu <hggu at connect.hku.hk>
Citation (from within R, entercitation("SynMut")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("SynMut")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("SynMut")Follow Installation instructions to use this package in your R session.
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