This is the development version of Cogito; for the stable release version, see Cogito.
Compare genomic intervals tool - Automated, complete, reproducible and clear report about genomic and epigenomic data setsBioconductor version: Development (3.22)
Biological studies often consist of multiple conditions which are examined with different laboratory set ups like RNA-sequencing or ChIP-sequencing. To get an overview about the whole resulting data set, Cogito provides an automated, complete, reproducible and clear report about all samples and basic comparisons between all different samples. This report can be used as documentation about the data set or as starting point for further custom analysis.
Author: Annika Bürger [cre, aut]
Maintainer: Annika Bürger <a.buerger at uni-muenster.de>
Citation (from within R, entercitation("Cogito")): Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("Cogito")
For older versions of R, please refer to the appropriate Bioconductor release.
DocumentationTo view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("Cogito")Follow Installation instructions to use this package in your R session.
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