Note
This page uses two different syntax variants:
Cython specific cdef
syntax, which was designed to make type declarations concise and easily readable from a C/C++ perspective.
Pure Python syntax which allows static Cython type declarations in pure Python code, following PEP-484 type hints and PEP 526 variable annotations.
To make use of C data types in Python syntax, you need to import the special cython
module in the Python module that you want to compile, e.g.
If you use the pure Python syntax we strongly recommend you use a recent Cython 3 release, since significant improvements have been made here compared to the 0.29.x releases.
Fused types allow you to have one type definition that can refer to multiple types. This allows you to write a single static-typed cython algorithm that can operate on values of multiple types. Thus fused types allow generic programming and are akin to templates in C++ or generics in languages like Java / C#.
Note
Fused types are not currently supported as attributes of extension types. Only variables and function/method arguments can be declared with fused types.
Quickstart¶char_or_float = cython.fused_type(cython.char, cython.double) @cython.ccall def plus_one(var: char_or_float) -> char_or_float: return var + 1 def show_me(): a: cython.char = 127 b: cython.double = 127 print('char', plus_one(a)) print('float', plus_one(b))
ctypedef fused char_or_float: char double cpdef char_or_float plus_one(char_or_float var): return var + 1 def show_me(): cdef: char a = 127 float b = 127 print('char', plus_one(a)) print('float', plus_one(b))
This gives:
>>> show_me() char -128 float 128.0
plus_one(a)
“specializes” the fused type char_or_float
as a char
, whereas plus_one(b)
specializes char_or_float
as a float
.
Fused types may be declared as follows:
my_fused_type = cython.fused_type(cython.int, cython.float)
ctypedef fused my_fused_type: int double
This declares a new type called my_fused_type
which can be either an int
or a double
.
Only names may be used for the constituent types, but they may be any (non-fused) type, including a typedef. I.e. one may write:
my_double = cython.typedef(cython.double) my_fused_type = cython.fused_type(cython.int, my_double)
ctypedef double my_double ctypedef fused fused_type: int my_doubleUsing Fused Types¶
Fused types can be used to declare parameters of functions or methods:
@cython.cfunc def cfunc(arg: my_fused_type): return arg + 1
cdef cfunc(my_fused_type arg): return arg + 1
If the same fused type appears more than once in the function arguments, then they will all have the same specialised type:
@cython.cfunc def cfunc(arg1: my_fused_type, arg2: my_fused_type): # arg1 and arg2 always have the same type here return arg1 + arg2
cdef cfunc(my_fused_type arg1, my_fused_type arg2): # arg1 and arg2 always have the same type here return arg1 + arg2
Here, the type of both parameters is either an int, or a double (according to the previous examples), because they use the same fused type name my_fused_type
. Mixing different fused types (or differently named fused types) in the arguments will specialise them independently:
def func(x: A, y: B): ...
This will result in specialized code paths for all combinations of types contained in A
and B
, e.g.:
my_fused_type = cython.fused_type(cython.int, cython.double) my_fused_type2 = cython.fused_type(cython.int, cython.double) @cython.cfunc def func(a: my_fused_type, b: my_fused_type2): # a and b may have the same or different types here print("SAME!" if my_fused_type is my_fused_type2 else "NOT SAME!") return a + b
ctypedef fused my_fused_type: int double ctypedef fused my_fused_type2: int double cdef func(my_fused_type a, my_fused_type2 b): # a and b may have the same or different types here print("SAME!" if my_fused_type is my_fused_type2 else "NOT SAME!") return a + b
Note
A simple typedef to rename the fused type does not currently work here. See Github issue #4302.
Fused types and arrays¶Note that specializations of only numeric types may not be very useful, as one can usually rely on promotion of types. This is not true for arrays, pointers and typed views of memory however. Indeed, one may write:
@cython.cfunc def myfunc(x: A[:, :]): ... # and @cython.cfunc cdef otherfunc(x: cython.pointer[A]): ...
cdef myfunc(A[:, :] x): ... # and cdef otherfunc(A *x): ...
Following code snippet shows an example with pointer to the fused type:
my_fused_type = cython.fused_type(cython.int, cython.float) @cython.cfunc def func(a: cython.pointer[my_fused_type]): print(a[0]) def main(): a: cython.int = 3 b: cython.float = 5.0 func(cython.address(a)) func(cython.address(b))
ctypedef fused my_fused_type: int double cdef func(my_fused_type *a): print(a[0]) cdef int b = 3 cdef double c = 3.0 func(&b) func(&c)
Note
In Cython 0.20.x and earlier, the compiler generated the full cross product of all type combinations when a fused type was used by more than one memory view in a type signature, e.g.
def myfunc(A[:] a, A[:] b): # a and b had independent item types in Cython 0.20.x and earlier. ...
This was unexpected for most users, unlikely to be desired, and also inconsistent with other structured type declarations like C arrays of fused types, which were considered the same type. It was thus changed in Cython 0.21 to use the same type for all memory views of a fused type. In order to get the original behaviour, it suffices to declare the same fused type under different names, and then use these in the declarations:
ctypedef fused A: int long ctypedef fused B: int long def myfunc(A[:] a, B[:] b): # a and b are independent types here and may have different item types ...
To get only identical types also in older Cython versions (pre-0.21), a ctypedef
can be used:
ctypedef A[:] A_1d def myfunc(A_1d a, A_1d b): # a and b have identical item types here, also in older Cython versions ...Selecting Specializations¶
You can select a specialization (an instance of the function with specific or specialized (i.e., non-fused) argument types) in two ways: either by indexing or by calling.
Indexing¶You can index functions with types to get certain specializations, i.e.:
import cython fused_type1 = cython.fused_type(cython.double, cython.float) fused_type2 = cython.fused_type(cython.double, cython.float) @cython.cfunc def cfunc(arg1: fused_type1, arg2: fused_type1): print("cfunc called:", cython.typeof(arg1), arg1, cython.typeof(arg2), arg2) @cython.ccall def cpfunc(a: fused_type1, b: fused_type2): print("cpfunc called:", cython.typeof(a), a, cython.typeof(b), b) def func(a: fused_type1, b: fused_type2): print("func called:", cython.typeof(a), a, cython.typeof(b), b) # called from Cython space cfunc[cython.double](5.0, 1.0) cpfunc[cython.float, cython.double](1.0, 2.0) # Indexing def functions in Cython code requires string names func["float", "double"](1.0, 2.0)
cimport cython ctypedef fused fused_type1: double float ctypedef fused fused_type2: double float cdef cfunc(fused_type1 arg1, fused_type1 arg2): print("cfunc called:", cython.typeof(arg1), arg1, cython.typeof(arg2), arg2) cpdef cpfunc(fused_type1 a, fused_type2 b): print("cpfunc called:", cython.typeof(a), a, cython.typeof(b), b) def func(fused_type1 a, fused_type2 b): print("func called:", cython.typeof(a), a, cython.typeof(b), b) # called from Cython space cfunc[double](5.0, 1.0) cpfunc[float, double](1.0, 2.0) # Indexing def function in Cython code requires string names func["float", "double"](1.0, 2.0)
Indexed functions can be called directly from Python:
>>> import cython >>> import indexing cfunc called: double 5.0 double 1.0 cpfunc called: float 1.0 double 2.0 func called: float 1.0 double 2.0 >>> indexing.cpfunc[cython.float, cython.float](1, 2) cpfunc called: float 1.0 float 2.0 >>> indexing.func[cython.float, cython.float](1, 2) func called: float 1.0 float 2.0
If a fused type is used as a component of a more complex type (for example a pointer to a fused type, or a memoryview of a fused type), then you should index the function with the individual component and not the full argument type:
@cython.cfunc def myfunc(x: cython.pointer[A]): ... # Specialize using int, not int * myfunc[cython.int](myint)
cdef myfunc(A *x): ... # Specialize using int, not int * myfunc[int](myint)
For memoryview indexing from python space we can do the following:
import numpy as np import cython myarray: cython.int[:, ::1] = np.arange(20, dtype=np.intc).reshape((2, 10)) my_fused_type = cython.fused_type(cython.int[:, ::1], cython.float[:, ::1]) def func(array: my_fused_type): print("func called:", cython.typeof(array)) func["int[:, ::1]"](myarray)
import numpy as np import cython myarray: cython.int[:, ::1] = np.arange(20, dtype=np.intc).reshape((2, 10)) ctypedef fused my_fused_type: int[:, ::1] float[:, ::1] def func(my_fused_type array): print("func called:", cython.typeof(array)) func["int[:, ::1]"](myarray)
The same goes for when using e.g. cython.numeric[:, :]
.
A fused function can also be called with arguments, where the dispatch is figured out automatically:
def main(): p1: cython.double = 1.0 p2: cython.float = 2.0 cfunc(p1, p1) # prints "cfunc called: double 1.0 double 1.0" cpfunc(p1, p2) # prints "cpfunc called: double 1.0 float 2.0"
def main(): cdef double p1 = 1.0 cdef float p2 = 2.0 cfunc(p1, p1) # prints "cfunc called: double 1.0 double 1.0" cpfunc(p1, p2) # prints "cpfunc called: double 1.0 float 2.0"
For a cdef
or cpdef
function called from Cython this means that the specialization is figured out at compile time. For def
functions the arguments are typechecked at runtime, and a best-effort approach is performed to figure out which specialization is needed. This means that this may result in a runtime TypeError
if no specialization was found. A cpdef
function is treated the same way as a def
function if the type of the function is unknown (e.g. if it is external and there is no cimport for it).
The automatic dispatching rules are typically as follows, in order of preference:
try to find an exact match
choose the biggest corresponding numerical type (biggest float, biggest complex, biggest int)
There are some built-in fused types available for convenience, these are:
cython.integral # short, int, long cython.floating # float, double cython.numeric # short, int, long, float, double, float complex, double complexCasting Fused Functions¶
Note
Pointers to functions are currently not supported by pure Python mode. (GitHub issue #4279)
Fused cdef
and cpdef
functions may be cast or assigned to C function pointers as follows:
cdef myfunc(cython.floating, cython.integral): ... # assign directly cdef object (*funcp)(float, int) funcp = myfunc funcp(f, i) # alternatively, cast it (<object (*)(float, int)> myfunc)(f, i) # This is also valid funcp = myfunc[float, int] funcp(f, i)Type Checking Specializations¶
Decisions can be made based on the specializations of the fused parameters. False conditions are pruned to avoid invalid code. One may check with is
, is not
and ==
and !=
to see if a fused type is equal to a certain other non-fused type (to check the specialization), or use in
and not in
to figure out whether a specialization is part of another set of types (specified as a fused type). In example:
bunch_of_types = cython.fused_type(bytes, cython.int, cython.float) string_t = cython.fused_type(cython.p_char, bytes, unicode) @cython.cfunc def myfunc(i: cython.integral, s: bunch_of_types) -> cython.integral: # Only one of these branches will be compiled for each specialization! if cython.integral is int: print('i is an int') elif cython.integral is long: print('i is a long') else: print('i is a short') if bunch_of_types in string_t: print("s is a string!") return i * 2 myfunc(cython.cast(cython.int, 5), b'm') # will print "i is an int" and "s is a string" myfunc(cython.cast(cython.long, 5), 3) # will print "i is a long" myfunc(cython.cast(cython.short, 5), 3) # will print "i is a short"
cimport cython ctypedef fused bunch_of_types: bytes int float ctypedef fused string_t: cython.p_char bytes unicode cdef cython.integral myfunc(cython.integral i, bunch_of_types s): # Only one of these branches will be compiled for each specialization! if cython.integral is int: print('i is int') elif cython.integral is long: print('i is long') else: print('i is short') if bunch_of_types in string_t: print("s is a string!") return i * 2 myfunc(<int> 5, b'm') # will print "i is an int" and "s is a string" myfunc(<long> 5, 3) # will print "i is a long" myfunc(<short> 5, 3) # will print "i is a short"Conditional GIL Acquiring / Releasing¶
Acquiring and releasing the GIL can be controlled by a condition which is known at compile time (see Conditional Acquiring / Releasing the GIL).
This is most useful when combined with fused types. A fused type function may have to handle both cython native types (e.g. cython.int or cython.double) and python types (e.g. object or bytes). Conditional Acquiring / Releasing the GIL provides a method for running the same piece of code either with the GIL released (for cython native types) and with the GIL held (for python types):
import cython double_or_object = cython.fused_type(cython.double, object) def increment(x: double_or_object): with cython.nogil(double_or_object is not object): # Same code handles both cython.double (GIL is released) # and python object (GIL is not released). x = x + 1 return x increment(5.0) # GIL is released during increment increment(5) # GIL is acquired during increment
cimport cython ctypedef fused double_or_object: double object def increment(double_or_object x): with nogil(double_or_object is not object): # Same code handles both cython.double (GIL is released) # and python object (GIL is not released). x = x + 1 return x increment(5.0) # GIL is released during increment increment(5) # GIL is acquired during increment__signatures__¶
Finally, function objects from def
or cpdef
functions have an attribute __signatures__
, which maps the signature strings to the actual specialized functions. This may be useful for inspection:
import cython fused_type1 = cython.fused_type(cython.double, cython.float) fused_type2 = cython.fused_type(cython.double, cython.float) @cython.ccall def cpfunc(a: fused_type1, b: fused_type2): print("cpfunc called:", cython.typeof(a), a, cython.typeof(b), b)
cimport cython ctypedef fused fused_type1: double float ctypedef fused fused_type2: double float cpdef cpfunc(fused_type1 a, fused_type2 b): print("cpfunc called:", cython.typeof(a), a, cython.typeof(b), b)
>>> from indexing import cpfunc >>> cpfunc.__signatures__, ({'double|double': <cyfunction __pyx_fuse_0_0cpfunc at 0x107292f20>, 'double|float': <cyfunction __pyx_fuse_0_1cpfunc at 0x1072a6040>, 'float|double': <cyfunction __pyx_fuse_1_0cpfunc at 0x1072a6120>, 'float|float': <cyfunction __pyx_fuse_1_1cpfunc at 0x1072a6200>},)
Listed signature strings may also be used as indices to the fused function, but the index format may change between Cython versions
>>> specialized_function = cpfunc["double|float"] >>> specialized_function(5.0, 1.0) cpfunc called: double 5.0 float 1.0
However, the better way how to index is by providing list of types as mentioned in Indexing section.
RetroSearch is an open source project built by @garambo | Open a GitHub Issue
Search and Browse the WWW like it's 1997 | Search results from DuckDuckGo
HTML:
3.2
| Encoding:
UTF-8
| Version:
0.7.4