Performs random-effect multiple interval mapping (REMIM) in full-sib families of autopolyploid species based on restricted maximum likelihood (REML) estimation and score statistics, as described in Pereira et al. (2020) <doi:10.1534/genetics.120.303080>.
Version: 0.2.4 Depends: R (≥ 4.0) Imports: ggplot2 (≥ 3.1), abind (≥ 1.4), MASS (≥ 7.3), gtools (≥ 3.9.2), CompQuadForm, Matrix, RLRsim, mvtnorm, nlme, quadprog, parallel, doParallel, foreach, stats, methods, mappoly, Rcpp (≥ 0.12.19) LinkingTo: Rcpp, RcppArmadillo, RcppProgress Suggests: rmarkdown, devtools, knitr Published: 2024-03-25 DOI: 10.32614/CRAN.package.qtlpoly Author: Guilherme da Silva Pereira [aut], Marcelo Mollinari [ctb], Gabriel de Siqueira Gesteira [ctb, cre], Zhao-Bang Zeng [ctb], Long Qu [ctb] (R code for variance component tests using score statistics in R/varComp.R), Giovanny Covarrubias-Pazaran [ctb] (C code for fitting mixed models with REML estimation in src/MNR.cpp) Maintainer: Gabriel de Siqueira Gesteira <gdesiqu at ncsu.edu> BugReports: https://github.com/gabrielgesteira/QTLpoly/issues License: GPL-3 URL: https://gabrielgesteira.github.io/QTLpoly/ NeedsCompilation: yes Citation: qtlpoly citation info Materials: README In views: Agriculture CRAN checks: qtlpoly resultsRetroSearch is an open source project built by @garambo | Open a GitHub Issue
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