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CRAN: Package poolABC

poolABC: Approximate Bayesian Computation with Pooled Sequencing Data

Provides functions to simulate Pool-seq data under models of demographic formation and to import Pool-seq data from real populations. Implements two ABC algorithms for performing parameter estimation and model selection using Pool-seq data. Cross-validation can also be performed to assess the accuracy of ABC estimates and model choice. Carvalho et al., (2022) <doi:10.1111/1755-0998.13834>.

Version: 1.0.0 Depends: R (≥ 2.10) Imports: doParallel, foreach, ggplot2, graphics, locfit, MetricsWeighted, nnet, poolHelper (≥ 1.1.0), RColorBrewer, rlang, scrm, stats, utils Suggests: knitr, rmarkdown Published: 2023-08-08 DOI: 10.32614/CRAN.package.poolABC Author: João Carvalho [aut, cre, cph], Vítor Sousa [aut] Maintainer: João Carvalho <jgcarvalho at fc.ul.pt> BugReports: https://github.com/joao-mcarvalho/poolABC/issues License: GPL (≥ 3) URL: https://github.com/joao-mcarvalho/poolABC NeedsCompilation: no Materials: README NEWS CRAN checks: poolABC results Documentation: Downloads: Linking:

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