Analysis of Surface Plasmon Resonance (SPR) and Biolayer Interferometry data, with automations for high-throughput SPR. This version of the package fits the 1: 1 binding model, with and without bulkshift. It offers optional local or global Rmax fitting. The user must provide a sample sheet and a Carterra output file in Carterra's current format. There is a utility function to convert from Carterra's old output format. The user may run a custom pipeline or use the provided 'Runscript', which will produce a pdf file containing fitted Rmax, ka, kd and standard errors, a plot of the sensorgram and fits, and a plot of residuals. The script will also produce a .csv file with all of the relevant parameters for each spot on the SPR chip.
Version: 0.1.0 Imports: magrittr, readxl, openxlsx, minpack.lm, zoo, stats, gridExtra, grid, parallel, readr, rlang, dplyr, stringr, tidyselect, ggplot2, purrr, forcats, tibble, tidyr Suggests: knitr, rmarkdown, markdown, qpdf Published: 2024-08-26 DOI: 10.32614/CRAN.package.htrSPRanalysis Author: Janice McCarthy Developer [aut, cre, cph], Kan Li Dev [aut], S. Moses Dennison [aut], Georgia D. Tomaras [aut] Maintainer: Janice McCarthy Developer <janice.mccarthy at duke.edu> License: GPL (≥ 3) NeedsCompilation: no Materials: README CRAN checks: htrSPRanalysis results [issues need fixing before 2025-07-14] Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=htrSPRanalysis to link to this page.
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