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CRAN: Package deltaccd

deltaccd: Quantify Rhythmic Gene Co-Expression Relative to a Reference

Infer progression of circadian rhythms in transcriptome data in which samples are not labeled with time of day and coverage of the circadian cycle may be incomplete. See Shilts et al. (2018) <doi:10.7717/peerj.4327>.

Version: 1.0.2 Depends: R (≥ 3.4) Imports: doRNG (≥ 1.6.6), foreach (≥ 1.4.3), ggplot2 (≥ 2.2.1), rlang (≥ 0.4.11), scales (≥ 0.5.0), statmod (≥ 1.4.30), data.table (≥ 1.14.0) Suggests: doParallel (≥ 1.0.11), knitr, rmarkdown, testthat (≥ 3.0.0), vdiffr Published: 2022-02-11 DOI: 10.32614/CRAN.package.deltaccd Author: Jake Hughey [aut, cre], Elliot Outland [aut] Maintainer: Jake Hughey <jakejhughey at gmail.com> License: GPL-2 URL: https://deltaccd.hugheylab.org, https://github.com/hugheylab/deltaccd NeedsCompilation: no Materials: NEWS CRAN checks: deltaccd results Documentation: Downloads: Linking:

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