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CRAN: Package mxnorm

mxnorm: Apply Normalization Methods to Multiplexed Images

Implements methods to normalize multiplexed imaging data, including statistical metrics and visualizations to quantify technical variation in this data type. Reference for methods listed here: Harris, C., Wrobel, J., & Vandekar, S. (2022). mxnorm: An R Package to Normalize Multiplexed Imaging Data. Journal of Open Source Software, 7(71), 4180, <doi:10.21105/joss.04180>.

Version: 1.0.3 Depends: R (≥ 3.5.0) Imports: magrittr, dplyr, rlang, fda, stats, data.table, reticulate, caret, e1071, ggplot2, tidyr, uwot, lme4, stringr, KernSmooth, kSamples, psych, fossil, glue, methods Suggests: knitr, janitor (≥ 2.1.0), testthat (≥ 3.0.0), rmarkdown, markdown, covr Published: 2023-05-01 DOI: 10.32614/CRAN.package.mxnorm Author: Coleman Harris [aut, cre] Maintainer: Coleman Harris <coleman.r.harris at vanderbilt.edu> License: MIT + file LICENSE NeedsCompilation: no Materials: README CRAN checks: mxnorm results Documentation: Downloads: Linking:

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