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CRAN: Package DDPNA

DDPNA: Disease-Drived Differential Proteins Co-Expression Network Analysis

Functions designed to connect disease-related differential proteins and co-expression network. It provides the basic statics analysis included t test, ANOVA analysis. The network construction is not offered by the package, you can used 'WGCNA' package which you can learn in Peter et al. (2008) <doi:10.1186/1471-2105-9-559>. It also provides module analysis included PCA analysis, two enrichment analysis, Planner maximally filtered graph extraction and hub analysis.

Version: 0.3.3 Depends: R (≥ 3.5) Imports: stats, ggplot2, ggalt, MEGENA, igraph, Hmisc, utils, grDevices, plyr, scales, grid, VennDiagram Suggests: WGCNA, Biostrings, impute, ggfortify Published: 2024-03-14 DOI: 10.32614/CRAN.package.DDPNA Author: Kefu Liu [aut, cre] Maintainer: Kefu Liu <liukefu19 at 163.com> BugReports: https://github.com/liukf10/DDPNA/issues License: GPL-2 URL: https://github.com/liukf10/DDPNA NeedsCompilation: no Materials: README CRAN checks: DDPNA results Documentation: Downloads: Linking:

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