Analysis of minor alleles in Illumina sequencing data of viral genomes. Functions in 'vivaldi' primarily operate on vcf files.
Version: 1.0.1 Depends: R (≥ 2.10) Imports: dplyr (≥ 1.0.2), ggplot2 (≥ 3.3.2), glue (≥ 1.4.2), magrittr (≥ 2.0.1), plotly (≥ 4.10.0), seqinr (≥ 4.2-8), tidyr (≥ 1.1.2), tidyselect (≥ 1.1.2), vcfR (≥ 1.12.0) Suggests: kableExtra, knitr, rmarkdown, testthat (≥ 3.0.0) Published: 2023-03-21 DOI: 10.32614/CRAN.package.vivaldi Author: Marissa Knoll [aut], Katherine Johnson [aut], Megan Hockman [aut], Eric Borenstein [aut], Mohammed Khalfan [aut], Elodie Ghedin [aut], David Gresham [aut, cre, cph] Maintainer: David Gresham <dg107 at nyu.edu> BugReports: https://github.com/GreshamLab/vivaldi/issues License: MIT + file LICENSE URL: https://github.com/GreshamLab/vivaldi NeedsCompilation: no Citation: vivaldi citation info Materials: README CRAN checks: vivaldi resultsRetroSearch is an open source project built by @garambo | Open a GitHub Issue
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