Reports markers list, differentially expressed genes, associated pathways, cell-type annotations, does batch correction and other related single cell analyses all wrapped within 'Seurat'.
Version: 0.2.0.0 Imports: Seurat, batchelor, dplyr, ReactomeGSA, celldex, SingleR, SummarizedExperiment, biomaRt, magrittr, rlang Suggests: knitr, rmarkdown Published: 2025-03-07 DOI: 10.32614/CRAN.package.scPipeline Author: Viswanadham Sridhara [aut, cre] Maintainer: Viswanadham Sridhara <Sridhara.Omics at gmail.com> License: MIT + file LICENSE NeedsCompilation: no Materials: README NEWS CRAN checks: scPipeline results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=scPipeline to link to this page.
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