Quantitative trait loci (QTL) analysis and exploration of meiotic patterns in autopolyploid bi-parental F1 populations. For all ploidy levels, identity-by-descent (IBD) probabilities can be estimated. Significance thresholds, exploring QTL allele effects and visualising results are provided. For more background and to reference the package see <doi:10.1093/bioinformatics/btab574>.
Version: 0.1.1 Depends: R (≥ 3.5.0) Imports: abind, doParallel, foreach, grDevices, graphics, Hmisc, knitr, nlme, RColorBrewer, Rcpp (≥ 0.12.19), reshape2, stats, utils LinkingTo: Rcpp, RcppArmadillo Suggests: igraph, mappoly (≥ 0.3.0), polymapR, rmarkdown Published: 2024-01-09 DOI: 10.32614/CRAN.package.polyqtlR Author: Peter Bourke [aut, cre], Christine Hackett [ctb], Chris Maliepaard [ctb], Geert van Geest [ctb], Roeland Voorrips [ctb], Johan Willemsen [ctb] Maintainer: Peter Bourke <pbourkey at gmail.com> License: GPL-3 NeedsCompilation: yes Citation: polyqtlR citation info In views: Agriculture CRAN checks: polyqtlR resultsRetroSearch is an open source project built by @garambo | Open a GitHub Issue
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