Implementation of the 'MarkerPen' algorithm, short for marker gene detection via penalized principal component analysis, described in the paper by Qiu, Wang, Lei, and Roeder (2020, <doi:10.1101/2020.11.07.373043>). 'MarkerPen' is a semi-supervised algorithm for detecting marker genes by combining prior marker information with bulk transcriptome data.
Version: 0.1.1 Depends: R (≥ 3.5.0) Imports: Rcpp (≥ 1.0.1), RSpectra, stats LinkingTo: Rcpp, RcppEigen, RSpectra Suggests: knitr, rmarkdown, prettydoc, scales Published: 2021-03-17 DOI: 10.32614/CRAN.package.markerpen Author: Yixuan Qiu, Jiebiao Wang, Jing Lei, and Kathryn Roeder Maintainer: Yixuan Qiu <yixuan.qiu at cos.name> License: GPL-2 | GPL-3 [expanded from: GPL] NeedsCompilation: yes SystemRequirements: C++11 Materials: README NEWS In views: Omics CRAN checks: markerpen results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=markerpen to link to this page.
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