R package to build and simulate deterministic discrete-time compartmental models that can be non-Markov. Length of stay in each compartment can be defined to follow a parametric distribution (d_exponential(), d_gamma(), d_weibull(), d_lognormal()) or a non-parametric distribution (nonparametric()). Other supported types of transition from one compartment to another includes fixed transition (constant()), multinomial (multinomial()), fixed transition probability (transprob()).
Version: 1.2.1 Depends: R (≥ 4.1.0) Imports: Rcpp (≥ 1.0.6), colorspace, rlang, glue LinkingTo: Rcpp, testthat Suggests: covr, knitr, rmarkdown, testthat (≥ 3.0.0), waldo, xml2, deSolve, tidyverse, DiagrammeR Published: 2025-06-02 DOI: 10.32614/CRAN.package.denim Author: Thinh Ong [aut, cph], Anh Phan [aut, cre], Marc Choisy [aut], Niels Lohman [ctb], Bjoern Hoehrmann [ctb], Florian Loitsch [ctb], Ingo Berg [ctb] Maintainer: Anh Phan <anhptq at oucru.org> BugReports: https://github.com/thinhong/denim/issues License: MIT + file LICENSE URL: https://drthinhong.com/denim/, https://github.com/thinhong/denim NeedsCompilation: yes Materials: README NEWS CRAN checks: denim results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=denim to link to this page.
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