The main attribute of 'PopVar' is the prediction of genetic variance in bi-parental populations, from which the package derives its name. 'PopVar' contains a set of functions that use phenotypic and genotypic data from a set of candidate parents to 1) predict the mean, genetic variance, and superior progeny value of all, or a defined set of pairwise bi-parental crosses, and 2) perform cross-validation to estimate genome-wide prediction accuracy of multiple statistical models. More details are available in Mohammadi, Tiede, and Smith (2015, <doi:10.2135/cropsci2015.01.0030>). A dataset 'think_barley.rda' is included for reference and examples.
Version: 1.3.2 Depends: R (≥ 3.5.0) Imports: BGLR, qtl, rrBLUP, stats, utils, methods, parallel Suggests: knitr, rmarkdown Published: 2024-10-20 DOI: 10.32614/CRAN.package.PopVar Author: Tyler Tiede [aut], Jeffrey Neyhart [aut, ctb, cre], Mohsen Mohammadi [ctb], Kevin Smith [ctb] Maintainer: Jeffrey Neyhart <neyhartje at gmail.com> BugReports: https://github.com/UMN-BarleyOatSilphium/PopVar/issues License: GPL-3 URL: https://github.com/UMN-BarleyOatSilphium/PopVar NeedsCompilation: no Materials: README NEWS In views: Agriculture CRAN checks: PopVar results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=PopVar to link to this page.
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