Maximum likelihood estimates (MLE) of the proportions of 5-mC and 5-hmC in the DNA using information from BS-conversion, TAB-conversion, and oxBS-conversion methods. One can use information from all three methods or any combination of two of them. Estimates are based on Binomial model by Qu et al. (2013) <doi:10.1093/bioinformatics/btt459> and Kiihl et al. (2019) <doi:10.1515/sagmb-2018-0031>.
Version: 0.3.3 Suggests: minfi, microbenchmark, GEOquery, knitr, rmarkdown, IlluminaHumanMethylation450kmanifest Published: 2019-10-17 DOI: 10.32614/CRAN.package.MLML2R Author: Samara Kiihl [aut, cre], Maria Jose Martinez-Garrido [aut], Arce Domingo-Relloso [aut], Jose Bermudez [aut], Maria Tellez-Plaza [aut] Maintainer: Samara Kiihl <samara at ime.unicamp.br> BugReports: https://github.com/samarafk/MLML2R/issues License: MIT + file LICENSE URL: https://github.com/samarafk/MLML2R NeedsCompilation: no Citation: MLML2R citation info CRAN checks: MLML2R results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=MLML2R to link to this page.
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