Similarity plots based on correlation and median absolute deviation (MAD); adjusting colors for heatmaps; aggregate technical replicates; calculate pairwise fold-changes and log fold-changes; compute one- and two-way ANOVA; simplified interface to package 'limma' (Ritchie et al. (2015), <doi:10.1093/nar/gkv007> ) for moderated t-test and one-way ANOVA; Hamming and Levenshtein (edit) distance of strings as well as optimal alignment scores for global (Needleman-Wunsch) and local (Smith-Waterman) alignments with constant gap penalties (Merkl and Waack (2009), ISBN:978-3-527-32594-8).
Version: 0.7 Depends: R (≥ 3.5.0) Imports: stats, utils, graphics, grDevices, RColorBrewer, robustbase, limma, grid, circlize, ComplexHeatmap Suggests: knitr, rmarkdown Published: 2021-08-08 DOI: 10.32614/CRAN.package.MKomics Author: Matthias Kohl [aut, cre] Maintainer: Matthias Kohl <Matthias.Kohl at stamats.de> License: LGPL-3 URL: https://www.stamats.de/ NeedsCompilation: no Citation: MKomics citation info Materials: NEWS CRAN checks: MKomics results Documentation: Downloads: Reverse dependencies: Linking:Please use the canonical form https://CRAN.R-project.org/package=MKomics to link to this page.
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