Tools for efficient processing of large, whole genome genotype data sets in variant call format (VCF). It includes several functions to calculate commonly used population genomic metrics and a method for reference panel free genotype imputation, which is described in the preprint Gurke & Mayer (2024) <doi:10.22541/au.172515591.10119928/v1>.
Version: 1.0.0 Imports: Rsamtools, GenomicRanges, foreach, doParallel, parallel, missForest, IRanges Suggests: knitr, rmarkdown, testthat (≥ 3.0.0), withr Published: 2024-11-25 DOI: 10.32614/CRAN.package.GenoPop Author: Marie Gurke [aut, cre] Maintainer: Marie Gurke <margurke at gmail.com> License: GPL (≥ 3) NeedsCompilation: no Citation: GenoPop citation info Materials: README CRAN checks: GenoPop results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=GenoPop to link to this page.
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