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CRAN: Package momentuHMM

momentuHMM: Maximum Likelihood Analysis of Animal Movement Behavior Using Multivariate Hidden Markov Models

Extended tools for analyzing telemetry data using generalized hidden Markov models. Features of momentuHMM (pronounced “momentum”) include data pre-processing and visualization, fitting HMMs to location and auxiliary biotelemetry or environmental data, biased and correlated random walk movement models, hierarchical HMMs, multiple imputation for incorporating location measurement error and missing data, user-specified design matrices and constraints for covariate modelling of parameters, random effects, decoding of the state process, visualization of fitted models, model checking and selection, and simulation. See McClintock and Michelot (2018) <doi:10.1111/2041-210X.12995>.

Version: 1.5.6 Depends: R (≥ 2.10) Imports: Rcpp, doParallel, foreach, numDeriv, CircStats, crawl (≥ 2.2.1), mvtnorm, sp, MASS, Brobdingnag, doRNG, rlang, raster LinkingTo: Rcpp, RcppArmadillo Suggests: testthat, setRNG, splines, splines2 (≥ 0.2.8), R.rsp, conicfit, ggplot2, ggmap, lubridate, dplyr, magrittr, scatterplot3d, BB, expm, matrixcalc, moveHMM, extraDistr, data.tree (≥ 1.0.0), geosphere, mitools, doFuture, future, car, survival, prodlim, nleqslv, qdapRegex Published: 2025-07-21 DOI: 10.32614/CRAN.package.momentuHMM Author: Brett McClintock [aut, cre], Theo Michelot [aut] Maintainer: Brett McClintock <brett.mcclintock at noaa.gov> BugReports: https://github.com/bmcclintock/momentuHMM/issues License: GPL-3 URL: https://github.com/bmcclintock/momentuHMM, https://github.com/bmcclintock/momentuHMM/discussions NeedsCompilation: yes Citation: momentuHMM citation info Materials: README, NEWS In views: MissingData, SpatioTemporal, Tracking CRAN checks: momentuHMM results Documentation: Downloads: Linking:

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