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CRAN: Package mbmixture

mbmixture: Microbiome Mixture Analysis

Evaluate whether a microbiome sample is a mixture of two samples, by fitting a model for the number of read counts as a function of single nucleotide polymorphism (SNP) allele and the genotypes of two potential source samples. Lobo et al. (2021) <doi:10.1093/g3journal/jkab308>.

Version: 0.6 Depends: R (≥ 3.1.0) Imports: stats, parallel, numDeriv Suggests: knitr, rmarkdown, testthat, devtools, roxygen2 Published: 2024-11-27 DOI: 10.32614/CRAN.package.mbmixture Author: Karl W Broman [aut, cre] Maintainer: Karl W Broman <broman at wisc.edu> BugReports: https://github.com/kbroman/mbmixture/issues License: MIT + file LICENSE URL: https://github.com/kbroman/mbmixture NeedsCompilation: no Citation: mbmixture citation info Materials: README NEWS CRAN checks: mbmixture results Documentation: Reference manual: mbmixture.pdf Vignettes: R/mbmixture User Guide (source, R code)
Downloads: Package source: mbmixture_0.6.tar.gz Windows binaries: r-devel: mbmixture_0.6.zip, r-release: mbmixture_0.6.zip, r-oldrel: mbmixture_0.6.zip macOS binaries: r-release (arm64): mbmixture_0.6.tgz, r-oldrel (arm64): mbmixture_0.6.tgz, r-release (x86_64): mbmixture_0.6.tgz, r-oldrel (x86_64): mbmixture_0.6.tgz Old sources: mbmixture archive Linking:

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