Phenotype study cohorts in data mapped to the Observational Medical Outcomes Partnership Common Data Model. Diagnostics are run at the database, code list, cohort, and population level to assess whether study cohorts are ready for research.
Version: 0.1.6 Depends: R (≥ 4.1.0) Imports: CodelistGenerator (≥ 3.4.0), CohortCharacteristics (≥ 1.0.0), CohortConstructor (≥ 0.4.0), cli, dplyr, IncidencePrevalence (≥ 1.2.0), omopgenerics (≥ 1.2.0), OmopSketch (≥ 0.5.0), magrittr, purrr, rlang, vctrs Suggests: CDMConnector (≥ 1.6.1), duckdb, DBI, gt, omock, testthat (≥ 3.0.0), knitr, visOmopResults (≥ 1.0.0), glue, RPostgres, PatientProfiles (≥ 1.2.2), ggplot2, ggpubr, stringr, shiny, DiagrammeR, DiagrammeRsvg, reactable, reactablefmtr, rsvg, sortable, shinycssloaders, here, DT, bslib, shinyWidgets, plotly, tidyr, scales, usethis, rmarkdown, CohortSurvival (≥ 1.0.2) Published: 2025-06-22 DOI: 10.32614/CRAN.package.PhenotypeR Author: Edward Burn [aut, cre], Marti Catala [aut], Xihang Chen [aut], Marta Alcalde-Herraiz [aut], Albert Prats-Uribe [aut] Maintainer: Edward Burn <edward.burn at ndorms.ox.ac.uk> License: Apache License (≥ 2) URL: https://ohdsi.github.io/PhenotypeR/ NeedsCompilation: no Materials: README CRAN checks: PhenotypeR results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=PhenotypeR to link to this page.
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