Creation of linkage maps in polyploid species from marker dosage scores of an F1 cross from two heterozygous parents. Currently works for outcrossing diploid, autotriploid, autotetraploid and autohexaploid species, as well as segmental allotetraploids. Methods are described in a manuscript of Bourke et al. (2018) <doi:10.1093/bioinformatics/bty371>. Since version 1.1.0, both discrete and probabilistic genotypes are acceptable input; for more details on the latter see Liao et al. (2021) <doi:10.1007/s00122-021-03834-x>.
Version: 1.1.6 Depends: R (≥ 3.5.0) Imports: doParallel, foreach, graphics, grDevices, igraph, knitr, MDSMap, stats, utils Suggests: ggplot2, Hmisc, RColorBrewer, reshape2, rmarkdown, polyRAD, updog, mappoly Published: 2024-05-31 DOI: 10.32614/CRAN.package.polymapR Author: Peter Bourke [aut, cre], Geert van Geest [aut], Roeland Voorrips [ctb], Yanlin Liao [ctb] Maintainer: Peter Bourke <pbourkey at gmail.com> License: GPL-2 | GPL-3 [expanded from: GPL] NeedsCompilation: no Citation: polymapR citation info In views: Agriculture CRAN checks: polymapR results Documentation: Downloads: Reverse dependencies: Linking:Please use the canonical form https://CRAN.R-project.org/package=polymapR to link to this page.
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