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NEWS
SqueakR 1.3.0 version 1.3.0 [GitHub release] [CRAN release]
- Added
animal field for each added experiment data, which updates experiment metadata for animals field. Updated compatibility to match semi-automatic and automatic SqueakR pipelines, as well as describe_experiment() function. Updated documentation to reflect the change
- Added Plotly sunburst plot (to functions list and dashboard) to graph proportions of collected data done per experimenter, as well as data collected per animal per group
- Added Plotly 3D surface plot (
plotSurface()) using 2D kernel density estimation to represent call density against principal frequency and call length
- Added functions for unblinding experimenters to data
- Added function â
plotContours() â which renders plotSurface() as a 2D rendering, flanked by histograms displaying distributions of principal frequency and call length
- Standardized some function naming (plotSurface instead of plotCallDataSurface, etc)
version 1.2.8
- Used
report package for analyses: added functions for reporting descriptive statistics for grouped data in SqueakR Dashboard tab
- Deprecated SqueakR Dashboard repository on GitHub and merged functions into SqueakR
- Added 3D cluster plot visualization function
plotClusters() against call length (z), principal frequency (x) and mean power (y) using plotly, available in base SqueakR and on dashboard
version 1.2.5
- Merged SqueakR dashboard into SqueakR package! Dashboard can now be run after loading the package by running
squeakRDashboard()
- Added function for calculating ANOVA between groups
- Added ANOVA tab on SqueakR Dashboard for determining statistical significance between call features
version 1.2.0
- Added fully-automatic pipeline function (
autosqueakRpipeline()) which references Google Sheet to add data without experimenter input for every file
- Renamed
experiment_pipeline() to semisqueakRpipeline()
- Added function (
remove_experiment_data()) to remove data from experiment object
- Updated
vignette to reflect package changes
version 1.0.0
- Recreated
NEWS.md file to track changes to the package.
- Added functions for generating experiment and analyzing data between experimental groups.
- Added visualizations including ethnograms, histograms, box-plots, and correlation matrices.
version 0.5.1
- Basic set of functions without all plotting functions
- Bug fixes
- Prepared development release for Mac
- Prepared development release for Windows
version 0.0.0.9000 NEWS.md setup
- added development
NEWS.md file
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