Provides efficient methods to compute local and genome wide genetic distances (corresponding to the so called Hudson Fst parameters) through moment method, perform chromosome segmentation into homogeneous Fst genomic regions, and selection sweep detection for multi-population comparison. When multiple profile segmentation is required, the procedure can be parallelized using the future package.
Version: 1.0.0 Depends: R (≥ 2.10) Imports: dplyr, fpopw, furrr, future, ggplot2, gplots, graphics, grDevices, purrr, rlang, scales, stats, stringr, tibble, tidyr, utils Published: 2022-07-03 DOI: 10.32614/CRAN.package.fst4pg Author: Tristan Mary-Huard [aut, cre], Guillem Rigaill [aut] Maintainer: Tristan Mary-Huard <tristan.mary-huard at agroparistech.fr> License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] NeedsCompilation: no CRAN checks: fst4pg results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=fst4pg to link to this page.
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