Provides functions and a Shiny application for downloading, analyzing and visualizing datasets from UCSC Xena (<http://xena.ucsc.edu/>), which is a collection of UCSC-hosted public databases such as TCGA, ICGC, TARGET, GTEx, CCLE, and others.
Version: 2.1.0 Depends: R (≥ 3.5) Imports: digest, dplyr (≥ 0.8.3), ezcox, forcats, ggplot2 (≥ 3.2.0), ggpubr (≥ 0.2), httr, magrittr (≥ 1.5), ppcor, psych, purrr, rlang, shiny (≥ 1.3.2), stats, stringr, tibble (≥ 2.1.3), tidyr, UCSCXenaTools, utils Suggests: covr (≥ 3.2.1), cowplot, DT (≥ 0.5), furrr, future, ggrepel, ggstatsplot, knitr, pacman, plotly, plyr, RColorBrewer (≥ 1.1.2), rmarkdown, Rtsne, scales, survival, survminer, testthat (≥ 2.0.1), umap Published: 2024-05-15 DOI: 10.32614/CRAN.package.UCSCXenaShiny Author: Shixiang Wang [aut, cre], Shensuo Li [aut], Yi Xiong [aut], Longfei Zhao [aut], Kai Gu [aut], Yin Li [aut], Fei Zhao [aut] Maintainer: Shixiang Wang <w_shixiang at 163.com> BugReports: https://github.com/openbiox/UCSCXenaShiny/issues License: GPL (≥ 3) URL: https://github.com/openbiox/UCSCXenaShiny, https://openbiox.github.io/UCSCXenaShiny/ NeedsCompilation: no Materials: README NEWS CRAN checks: UCSCXenaShiny results Documentation: Downloads: Linking:Please use the canonical form https://CRAN.R-project.org/package=UCSCXenaShiny to link to this page.
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