Implements Affinity Propagation clustering introduced by Frey and Dueck (2007) <doi:10.1126/science.1136800>. The algorithms are largely analogous to the 'Matlab' code published by Frey and Dueck. The package further provides leveraged affinity propagation and an algorithm for exemplar-based agglomerative clustering that can also be used to join clusters obtained from affinity propagation. Various plotting functions are available for analyzing clustering results.
Version: 1.4.13 Depends: R (≥ 3.3.0) Imports: Rcpp (≥ 0.11.1), methods, Matrix, stats, graphics, grDevices LinkingTo: Rcpp Suggests: knitr Published: 2024-04-26 DOI: 10.32614/CRAN.package.apcluster Author: Ulrich Bodenhofer [aut, cre], Johannes Palme [ctb], Chrats Melkonian [ctb], Andreas Kothmeier [aut], Nikola Kostic [ctb] Maintainer: Ulrich Bodenhofer <ulrich at bodenhofer.com> License: GPL-2 | GPL-3 [expanded from: GPL (≥ 2)] URL: https://github.com/UBod/apcluster NeedsCompilation: yes Citation: apcluster citation info Materials: README NEWS In views: Cluster CRAN checks: apcluster results Documentation: Downloads: Reverse dependencies: Reverse depends: LPKsample Reverse imports: AnimalSequences, bioregion, Clustering, cogena, debCAM, IPCAPS, ipft, kebabs, Linnorm, mina, outlierensembles, schemr, SPIAT, WebGestaltR Reverse suggests: autonomics, bluster, DAPAR, diceR, FCPS, GeneExpressionSignature, mlr3cluster, shipunov, simplifyEnrichment Linking:Please use the canonical form https://CRAN.R-project.org/package=apcluster to link to this page.
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