Provides a set of tools to perform quantitative trait locus (QTL) analysis in experimental crosses. It is a reimplementation of the 'R/qtl' package to better handle high-dimensional data and complex cross designs. Broman et al. (2019) <doi:10.1534/genetics.118.301595>.
Version: 0.38 Depends: R (≥ 3.1.0) Imports: Rcpp (≥ 1.0.7), yaml (≥ 2.1.13), jsonlite (≥ 0.9.17), data.table (≥ 1.10.4-3), parallel, stats, utils, graphics, grDevices, RSQLite LinkingTo: Rcpp, RcppEigen Suggests: testthat, devtools, roxygen2, vdiffr, qtl Published: 2025-06-02 DOI: 10.32614/CRAN.package.qtl2 Author: Karl W Broman [aut, cre], R Core Team [ctb] Maintainer: Karl W Broman <broman at wisc.edu> BugReports: https://github.com/rqtl/qtl2/issues License: GPL-3 Copyright: Code for Brent's method for univariate function optimization was taken from R 3.2.2 (Copyright 1995, 1996 Robert Gentleman and Ross Ihaka, Copyright 2003-2004 The R Foundation, Copyright 1998-2014 The R Core Team). URL: https://kbroman.org/qtl2/, https://github.com/rqtl/qtl2 NeedsCompilation: yes Citation: qtl2 citation info Materials: README NEWS CRAN checks: qtl2 results Documentation: Downloads: Reverse dependencies: Linking:Please use the canonical form https://CRAN.R-project.org/package=qtl2 to link to this page.
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