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CRAN: Package goat

goat: Gene Set Analysis Using the Gene Set Ordinal Association Test

Perform gene set enrichment analyses using the Gene set Ordinal Association Test (GOAT) algorithm and visualize your results. Koopmans, F. (2024) <doi:10.1038/s42003-024-06454-5>.

Version: 1.1.2 Depends: R (≥ 4.1.0), dplyr (≥ 1.0.3) Imports: tibble (≥ 3.0.0), tidyselect (≥ 1.2.0), tidyr (≥ 1.1.2), data.table (≥ 1.14.0), Matrix (≥ 1.4-0), readxl (≥ 1.4.1), writexl (≥ 1.4.1), Rcpp (≥ 1.0.9), vctrs (≥ 0.3.8), MonoPoly (≥ 0.3-10), ggplot2 (≥ 3.3.0), pheatmap (≥ 1.0.8), treemap (≥ 2.4), igraph (≥ 1.2.5), ggraph (≥ 2.0.0) LinkingTo: Rcpp Suggests: AnnotationDbi, GO.db, org.Hs.eg.db, org.Pt.eg.db, org.Mmu.eg.db, org.Mm.eg.db, org.Rn.eg.db, org.Dr.eg.db, org.Dm.eg.db, org.Ce.eg.db, fgsea, testthat (≥ 3.0.0) Published: 2025-02-22 DOI: 10.32614/CRAN.package.goat Author: Frank Koopmans [aut, cre] Maintainer: Frank Koopmans <ftwkoopmans at gmail.com> License: Apache License (≥ 2) URL: https://github.com/ftwkoopmans/goat/ NeedsCompilation: yes Language: en-US Citation: goat citation info Materials: README NEWS CRAN checks: goat results Documentation: Downloads: Linking:

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